Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1693 ATGGGGAACAAAATTGCGCGCACAACCCAAGTTTCGGCTTCCGAGTACTACCTTCATGACCTGCCCTCCACTTACAATCTCGTCTTGAAGGAGGTTCTGGGTCGAGGCCGTTTCTTCAAGTCTATTCAGTGCAAGCATGACGAGGGTTTGGTTCTTGTCAAAGTCTATTTCAAGCGTGGTGATTTCATCGATCTCAGGGAATACGAACGCCGTCTTAGTCAGATCAGAGACATTTGCCGGGGCATTGACCACGCTCACGTTTGGCCCTTTCAGTTTTGGCAAGAAACAGATAAAGCAGCATACCTCTTGAGGCAATATTTCTTCCATAATCTGCACGATCGACTTAGTACTCGACCTTTTCTCAGTCTGGTTGAGAAGAAATGGTTGGCTTTCCAGTTGGTTCTTGCTGTGAAACAAAGCCACGAGAAGGGAATATGTCATGGTGATATTAAGTGTGAGAATGTGCTGGTTACATCCTGGAATTGGCTTTACCTTGCTGACTTCGCATCTTTCAAGCCCACTTACATTCCATATGATGACCCTTCTGATTTCTCTTTTTTCTTTGACACTGGTGGAAGAAGGCTCTGTTATCTAGCGCCTGAGAGATTTTATGAACATGGCGGGGAGGTGCAGGTGGCACAAGATGCCCCTTTGAAGACGTCAATGGATATATTTGCAGTTGGGTGTGTAATTGCAGAACTTTTTCTTGAGGGACAGCCACTATTTGAACTATCTCAACTTCTTGCGTATCGCAGAGGACAGTATGATCCTAGCCAAAATCTTGAGAAAATACCAGATCCTGGAATCCGTAAAATGATACTACACATGATTCAATTAGAACCAGAGTCACGACTTTCTGCTGAAAGCTATTTAAAGGAATATGCAGCAGTTGTGTTCCCAACCTATTTTTCACCATTTCTGCATGATTTTTACCGCTGCTGGAGTCCCCTCCATTCTGATATGAAGGTTTTATTATGTCAAAGTGCTTTCCCCGAGATACTTAAACAAATGATGAACAATAAGTCACCTGAGGAGGTTATTTCTGGTGAACTTTTGGAAGAAATGGTTGCTAAAGAAAATGTCAATTTCATGAAGGACTCACTGATAAAGAGAGAGGAGATAGGAAATGGCTTAATTCATGATCACTATGAACTTCTTGGTGATATCAGTAGCCTACTGAGGGATGCTAAAAAACGTAGTCATTTATCTGGTCCCCGGCATGTAACGGGAAATGCACCCACTTCTACCTTTTCTGAAAATCTAAAAAATTTGCAATCTCCTGGTGAGCTACTTCAAACTATTTCCAATGCATTTTGCGGAAATGATCATCCCTTTCTGAAAAACATTACAATGAATGATTTGAAGTCATTAATGTCTGATTATGATAGTCAATCAGATACTTTTGGAATGCCTTTCTTATCGTTACCCAAGGACAGTATGAGATGTGAAGGCATGGTTTTGATTACTTCTTTGCTCTGCTCCTGCATTCGCAATATCAAGTTGCCACACCTGAGGAGGGCAGCTGTGCTCTTGTTGAAGGCTTCTGCATTATATACTGATGATGAAGATCGTTTGCAACGTGTTATCCCATATGTTATTGCAATGCTTTCAGATCCGGCAGCAATTGTGCGTTGTGCTGCTTTAGAGAGTTTGTGTGACATTCTGCCCTTAGTCCGAGATTTTCCTCCTAGTGATGCAAAGATATTTCCCGAATACATACTTCCAATGCTTTCTATGCTTCCTGATGATCCAGAGGAAAGTGTGAGGATATGTTATGCCAGCAATATAGCTAAGCTGGCACTAACTGCTTATGGATTCTTGATACACTCAATAAGTTTGAGTGAGGCTGGTGTACTTGATGAATTGAGTTCACAGAAGCCATTGATATCATTGAGTCAGACCACTGGAAGATTGCAGAGAATAAATGGTGATGTGCAACTTTTGCAGCTGAGGAAATCAATTGCAGAGGTTGTCCAAGAACTTGTTATGGGTCCAAAGCAAACTCCAAATATTAGGAGAGCACTCCTTCAGGACATTGGTAAATTGTGTTATTTCTTTGGTCAGAGACATAGTAATGACTTTCTCTTACCCATCCTCCCTGCTTTCCTTAATGATCGGGATGAACAATTAAGGGCAGTATTCTTTGAAAAGATTGTGTATGTCTGCTTTTTTGTGGGTGAAAGAAGTGTAGAAGAATATCTTTTACCTTACATAGAGCAGGCTTTAAGTGACACTATGGAGGCTGTCATTGTTAGAGCCTTAGATTGTTTGACCATTCTATGCAAAAGTGGGTTCTTCCGGAAGAGGATACTGCTTGAAATGATAGAGCGTGCATTTCCTTTACTGTGTTATCCTAGTGAATGGGTACGGAGATCAGTCGTTTCTTTCATTGCTGCTAGCAGTGAGAGCTTGGGGGCAGTAGATTCTTACGTTTTTCTTGCTCCTCTTATACAGCCTTTCCTCCGCAGACAACCTGTATCTTTAGCTTCTGAGAGGGCTCTTTTTTCCTGCTTAAAACCTCCTGTATCAAGACAGGTTTTTTATGAAGTATTGGAGAACTCCAGAAGTTCAGACATGTTAGAAAGACAAAGAAAGATATGGTATAGTTCATCATCACAATCAAAACTATGGGAAATGGATTTGCTAAGAAAAGGAATGGAGGAGTTGGACTCATTAAAGAGCTGGCCTGACAAGCAACAAGATCCTGGGGGTAAACAATCTGTTGACACTGGCATCCAACAGCCAGGGCTAACTAATTGTGACGAAGCTGACACAAAGTTGAGAAATATGGGGGCCTTTATGCACAATGATTGCAGTATGGTAGGACCTCGTGATCCCCAATGCCTGGAGAAGTTACAATTCTCTGGATTGATGTCCCCACAGGTTAGTGGCATGAATAGTTTGACATATGAAAAGTCATCAGATGGCATTCCTTTATACTCTTTCAGCATGGACAGGCGGGCTATGGGAATTCCTCCTGCAGCATCTGATTCTCCACTGCAAATGAATTCTCTGGGTATCAGTTCGTCCTCCATGCCTTGGGTTAGTCCTGTTAGTAAGTCCTTTAATTTGGCTAGTTCAGTTCCAGCACCAAAGTTTGTTTCAGGTTCTTTTAGCATCAGCAATGGTTCTAAACAGTTCTATCGAGTGGTGCATGAACCAGATGGTAGGGAAAGTGAAACAGGATATGTTAATAGCAAAATTCAAGACGTGGGATTATCTGCTAATGTCAAAGGTAGTACAATTGCACTGGAAGATGCAACCAACCAAACTGATCTATCAGGATTTCCATCTTTTTCTCGAACATCCATTCCTGATTCTGGTTGGAGGCCCCGTGGGGTGTTGGTTGCACACCTCCAGGAGCACCATTCATCTGTCAATGACATAGCTATTTCCACTGATCATAGCTTCTTTGTGAGCACATCTGATGATTCTACAATCAAGATATGGGATTCTAGAAAGCTGGAAAAGGACATTTCATTCAGGTCAAGGCTAACCTATCACCTGGAAGGAAGCCGGGCGCTTTGTGCAGCAATGCTTCGGGGTTCTGCACAAGTAATAGTTGGAGCATGTGATGGATTAATTCATATGTTTTCTGTCGATCATATCTCTAGAGGTCTAGGAAATGTTGTTGAGAAGTATTCTGGTGTTGCTGATATCACAAAGAAGGATATCAAGGAAGGTGCCATACTCAACCTTTTGAATTACCCTGTGGATAATTATACCATCATGTTTAGTACCCAGAACTGTGGTATTCATCTGTGGGATACTAGGTCAAATTCCAGTACATGGACTCGAAAAGCTACTCCTGAGGAGGGCTATATTTCTTCACTGGTAACAGGGCCTTGTGGTAATTGGTTTGTATCAGGGTCATCAAGGGGTGTTCTTACTCTTTGGGATCTGAGATTTCTTGTACCTGTGAACTATTGGCAGTATTCTCTTGCCTGCCCTATTGAAAAGATGTGCCTCTTTCTTCCTCCAAATGCCTCTCTATCTTCAACAGTGAGACCCCTTGTTTATGTGGCTGCAGGAAGCAATGAAGTTTCTCTTTGGAATGCAGAGAATGGTAGCTGCCACCAGGTATTGAGGGTGACCAACTATGACAATGATGCAGAAAAGTCTGAACTGCCTTGGGCCTTGGCCAGACCTTCTAGTAAGGCAACTTCTAAACAAGATCTGAGACGAAATGTCAATCCCAAGTACAGAGTTGATGAGCTAAATGAACCTCCTCCCCGTCTTCCTGGTATCCGTTCATTACTTCCCTTGCCAGGAGGTGATGTATTGACTGGGGGTACTGACTTGAAGATACGTCGATGGGATCATTACAGTCCTGACAAAAGTTACTGTATTTGTGGACCAAACTTAAAAGGAGTAGGAAATGATGACTTTTATGAAGCAAAGTCTAGTTTTGGAGTGCAAGTTGTACAGGAGACAAAGAGACGTCCTCTCACAAACAAGATGACGGCAAAGGCAGCTGTCGCAGCTGCTGCCACTGATTCTGCAGGTTGCCACCGTGACTCTATTCTTTCTCTGGCTTCTGTTAAGTTAAACCAGAGACTCTTATTATCAAGTGGTAGAGATGGGGCCATTAAGGTTTGGAAGTAA 4605 0.4241 MGNKIARTTQVSASEYYLHDLPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGDFIDLREYERRLSQIRDICRGIDHAHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSLVEKKWLAFQLVLAVKQSHEKGICHGDIKCENVLVTSWNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHGGEVQVAQDAPLKTSMDIFAVGCVIAELFLEGQPLFELSQLLAYRRGQYDPSQNLEKIPDPGIRKMILHMIQLEPESRLSAESYLKEYAAVVFPTYFSPFLHDFYRCWSPLHSDMKVLLCQSAFPEILKQMMNNKSPEEVISGELLEEMVAKENVNFMKDSLIKREEIGNGLIHDHYELLGDISSLLRDAKKRSHLSGPRHVTGNAPTSTFSENLKNLQSPGELLQTISNAFCGNDHPFLKNITMNDLKSLMSDYDSQSDTFGMPFLSLPKDSMRCEGMVLITSLLCSCIRNIKLPHLRRAAVLLLKASALYTDDEDRLQRVIPYVIAMLSDPAAIVRCAALESLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHSISLSEAGVLDELSSQKPLISLSQTTGRLQRINGDVQLLQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCYFFGQRHSNDFLLPILPAFLNDRDEQLRAVFFEKIVYVCFFVGERSVEEYLLPYIEQALSDTMEAVIVRALDCLTILCKSGFFRKRILLEMIERAFPLLCYPSEWVRRSVVSFIAASSESLGAVDSYVFLAPLIQPFLRRQPVSLASERALFSCLKPPVSRQVFYEVLENSRSSDMLERQRKIWYSSSSQSKLWEMDLLRKGMEELDSLKSWPDKQQDPGGKQSVDTGIQQPGLTNCDEADTKLRNMGAFMHNDCSMVGPRDPQCLEKLQFSGLMSPQVSGMNSLTYEKSSDGIPLYSFSMDRRAMGIPPAASDSPLQMNSLGISSSSMPWVSPVSKSFNLASSVPAPKFVSGSFSISNGSKQFYRVVHEPDGRESETGYVNSKIQDVGLSANVKGSTIALEDATNQTDLSGFPSFSRTSIPDSGWRPRGVLVAHLQEHHSSVNDIAISTDHSFFVSTSDDSTIKIWDSRKLEKDISFRSRLTYHLEGSRALCAAMLRGSAQVIVGACDGLIHMFSVDHISRGLGNVVEKYSGVADITKKDIKEGAILNLLNYPVDNYTIMFSTQNCGIHLWDTRSNSSTWTRKATPEEGYISSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNYWQYSLACPIEKMCLFLPPNASLSSTVRPLVYVAAGSNEVSLWNAENGSCHQVLRVTNYDNDAEKSELPWALARPSSKATSKQDLRRNVNPKYRVDELNEPPPRLPGIRSLLPLPGGDVLTGGTDLKIRRWDHYSPDKSYCICGPNLKGVGNDDFYEAKSSFGVQVVQETKRRPLTNKMTAKAAVAAAATDSAGCHRDSILSLASVKLNQRLLLSSGRDGAIKVWK 1534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1693 1534 SUPERFAMILY ARM repeat 426 822 IPR016024 -
Glsi12g1693 1534 ProSiteProfiles HEAT repeat profile. 528 560 IPR021133 -
Glsi12g1693 1534 SMART WD40_4 1162 1199 IPR001680 GO:0005515
Glsi12g1693 1534 SMART WD40_4 1263 1300 IPR001680 GO:0005515
Glsi12g1693 1534 SMART WD40_4 1494 1534 IPR001680 GO:0005515
Glsi12g1693 1534 SMART WD40_4 1406 1440 IPR001680 GO:0005515
Glsi12g1693 1534 SMART WD40_4 1112 1151 IPR001680 GO:0005515
Glsi12g1693 1534 Gene3D Transferase(Phosphotransferase) domain 1 22 302 - -
Glsi12g1693 1534 ProSiteProfiles Trp-Asp (WD) repeats profile. 1501 1534 IPR001680 GO:0005515
Glsi12g1693 1534 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1534 IPR045162 GO:0004674|GO:0016236|GO:0045324
Glsi12g1693 1534 CDD STKc_Vps15 16 303 - -
Glsi12g1693 1534 SMART serkin_6 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g1693 1534 ProSiteProfiles Trp-Asp (WD) repeats profile. 1119 1151 IPR001680 GO:0005515
Glsi12g1693 1534 Gene3D - 446 613 IPR011989 -
Glsi12g1693 1534 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1119 1151 - -
Glsi12g1693 1534 FunFam Protein kinase family protein / WD-40 repeat family protein 24 348 - -
Glsi12g1693 1534 Gene3D - 1057 1219 IPR015943 GO:0005515
Glsi12g1693 1534 Gene3D - 1220 1311 IPR015943 GO:0005515
Glsi12g1693 1534 FunFam Protein kinase family protein / WD-40 repeat family protein 623 833 - -
Glsi12g1693 1534 SUPERFAMILY WD40 repeat-like 1113 1534 IPR036322 GO:0005515
Glsi12g1693 1534 Gene3D - 1321 1534 IPR015943 GO:0005515
Glsi12g1693 1534 Gene3D - 614 838 IPR011989 -
Glsi12g1693 1534 Pfam HEAT repeat 528 556 IPR000357 GO:0005515
Glsi12g1693 1534 MobiDBLite consensus disorder prediction 900 918 - -
Glsi12g1693 1534 ProSiteProfiles HEAT repeat profile. 695 733 IPR021133 -
Glsi12g1693 1534 MobiDBLite consensus disorder prediction 893 918 - -
Glsi12g1693 1534 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Glsi12g1693 1534 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g1693 1534 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1501 1534 - -
Glsi12g1693 1534 Pfam WD domain, G-beta repeat 1115 1151 IPR001680 GO:0005515
Glsi12g1693 1534 ProSiteProfiles Protein kinase domain profile. 27 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g1693 1534 FunFam phosphoinositide 3-kinase regulatory subunit 4-like 474 613 - -
Glsi12g1693 1534 SUPERFAMILY Protein kinase-like (PK-like) 26 324 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1693 Glsi-ChrGlsi12 33411425 33419977 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1693 31 324 AGC Kinase Gene Family AT3G08730 25.680 2.15e-10 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Glsi12g1693 Pkinase 3.1e-20 CL0016