Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1691 ATGGGAAGAGCCACCAGGTGGTTGAAGAGCTTGTTTGGGATAAAGAGAGACGGAGCCGGAAAACATTCAAATTCCGGGGACCTAAGAGACACGAAATGGTCTACTCCTTCTCATTCAGAGAGAGATCCCAGAGGTTTATGCCATAATCCAGCTACTATTCCACCAAACATTTCCCCTGCAGAAGCTGCTTGGCTACAATCATTCTACACAGAAACAGAGAAGGAGCAGAGCAAGCACGCAATTGCTGTGGCTGCGGCCACCGCAGCCGCAGCCGATGCTGCTGTAGCAGCAGCGCAGGCGGCCGTTGCGGTGGTTCGCCTCACCAGCCATGGCAGAGGCACCATGTTCGGTGGTGGACACGAGAGGTGGGCTGCTGTCAAGATTCAAACAGTATTTAGGGGTTACTTGGCAAGGAAGGCACTGAGAGCCTTAAAAGGATTGGTGAAGTTACAAGCACTTGTCAGAGGCTATTTAGTGAGGAAGCAAGCCACAGCAACCTTGCATGGTATGCAGGCTCTTATTAGAGCTCAAGCCACAATCAGGTCTCAGAAAGCTCGCCAGCTCATGAACAAGGACAGGGAATGCTATAGATTTGAAGCCCGAGCACGAAGATCCACGGAGAGATTTGATGACACTAGGAGTGAGTACACAGCTCCTATTCACAGCAGAAGGATATCATCTTCTTTTGATGCCGCGATTAATAACACTAACAGTGTTGATGGAAGTCCAAAAATTGTGGAAGTTGACCCTGGCAGGCCTAAATCAAGGTCTCGCAGGACTAATACTTCAATCTCAGATTTTGGCGATGACCCACCATTCCAAGCACTTTCCTCTCCTCTCCCAATCCCATCTCGTACCCCTGCTCGTTTATCCATACTGGATTATCGCCGGAATCTGCAGGACTCAGATTGGGGCTTAACGGGGGAAGAATGCTGGTATTCTACAGCGCAGAGCACTCCACGGTTCACCAATTCTATTGGTCCGGTGACACCTTCTAAGAGCGTTTGCGCCGACAGCCTTTTCCGGCAATACGGCAATTTTCCAAATTACATGGCCAGCACTCAGTCTTTCAAGGCCAAATTGAGATCTCATAGTGCTCCGAAGCAAAGGCCAGAACCCGTTTCGAAGAAGAGGCTTTCCCTGAATGAAATGATGGAGTGCAGAAGTAGTTTGAGTGGGGTTCGAATGCAGAGGTCTTGCTCGCAGGTTCAGGAAGTCATTAGTTTCAAGAATGCTGTAATGGGTAAGCTTGAGAAGTCGGCAGAATTTGGCAGGGAGACGGATAGAAACTATGTGCGGAAGAGGTGGTGA 1311 0.495 MGRATRWLKSLFGIKRDGAGKHSNSGDLRDTKWSTPSHSERDPRGLCHNPATIPPNISPAEAAWLQSFYTETEKEQSKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMFGGGHERWAAVKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQATATLHGMQALIRAQATIRSQKARQLMNKDRECYRFEARARRSTERFDDTRSEYTAPIHSRRISSSFDAAINNTNSVDGSPKIVEVDPGRPKSRSRRTNTSISDFGDDPPFQALSSPLPIPSRTPARLSILDYRRNLQDSDWGLTGEECWYSTAQSTPRFTNSIGPVTPSKSVCADSLFRQYGNFPNYMASTQSFKAKLRSHSAPKQRPEPVSKKRLSLNEMMECRSSLSGVRMQRSCSQVQEVISFKNAVMGKLEKSAEFGRETDRNYVRKRW 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1691 436 SMART iq_5 120 142 IPR000048 GO:0005515
Glsi12g1691 436 SMART iq_5 143 164 IPR000048 GO:0005515
Glsi12g1691 436 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
Glsi12g1691 436 Pfam IQ calmodulin-binding motif 148 162 IPR000048 GO:0005515
Glsi12g1691 436 Pfam IQ calmodulin-binding motif 122 142 IPR000048 GO:0005515
Glsi12g1691 436 ProSiteProfiles IQ motif profile. 170 197 IPR000048 GO:0005515
Glsi12g1691 436 Gene3D - 120 163 - -
Glsi12g1691 436 MobiDBLite consensus disorder prediction 20 45 - -
Glsi12g1691 436 ProSiteProfiles IQ motif profile. 121 149 IPR000048 GO:0005515
Glsi12g1691 436 MobiDBLite consensus disorder prediction 235 281 - -
Glsi12g1691 436 PANTHER IQ-DOMAIN 5-RELATED 1 383 - -
Glsi12g1691 436 MobiDBLite consensus disorder prediction 19 48 - -
Glsi12g1691 436 Pfam Protein of unknown function (DUF4005) 315 392 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1691 Glsi-ChrGlsi12 33402882 33404346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1691 1 396 IQD Protein Family AT3G16490 51.100 1.80e-100 303