Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1676 ATGGAACAACCCCTGCCCTTGGACTCGGAGGACTTGCAACTCGACCGAGTCCGCTCAGAGTTGGCCCTCATCAGTTCTGGCTCCGGTTCCGGCATATCCTTTATAATTGGCTCCGAAGGCTCCCGGAGCACCACCAGCTCCGCCGACATTTCCACTATTAGAACCGGCTCCGGCAACATTTCGGGGCTTCTAGTCTCCGAGCCAGTGCAGTCGCCTCGGTTGCTTGACCCTGCTCCGTCGGAAAATATGAGGGCGACGAGGGACAAGTGCGTGGGAAGGAACAAGAAGGAAGTGCGTTGGGGATTCACGTCGGTGATTGGGCGAAGGAGAGAGATGGAGGACGCTATTGCTGTTGTTCCGGGGTTCATGTCCCTCACGTGCGATCACACCGGCGGTTGTACGGCTCCTGGCTCGAAATCCTCCGGCGAGATCTCGCCCGTTCATTTCTTCGGCGTTTACGACGGCCACGGTGGATCTCAGGTGGCTAATTTTTGTGCCAAGCGGATGCATGAAGTTATAGCAGAAGAGTGGGATCGAGAAATAACTGATGGCAAAGAATGGCAGGGAAAGTGGGAAGCCGTTTTTGCTAGTGGCTTTGAGAAGACTGACAGTGAAATCGTAACAGGCGCAGTTGCTCCAGAAATGGTAGGATCTACTGCTGCTGTGGTGGTTCTATCTCGTTGTCAAATAATTACTTCTAACTGTGGTGACTCAAGGGCAGTTCTTTACCGCGGGACTCAAACAATCCCCTTAACAGTGGATCAGAAGCCTGATAGACAAGATGAACTGTTGAGGATTGAAGGAGGAGGAGGAAAAGTCATAAACTGGAATGGAGCTAGGGTGTTTGGAGTTCTTGCCATGTCCAGGGCCATAGGTGATCGGTACTTGAGGCCATGGATTATTCCAGTGCCTGAGACAACTCTTACAACGAGAACTGACGAGGATGAGTGCTTAATTTTGGCAAGTGATGGGCTTTGGGATGTAATGACGAATGCAGAGGTTGGGGAAGTTGCACGCCATATTCTAAGAAGGCGTCGGAAGTCCTTGTCAATGGAAGAAATTTCACCTGCACAAGTTGTTGCCGATAGCCTCACTGAGATAGCATATAGTAGACATAGTAGAGACAATATTTCAATCATAGTTGTTGATCTGAAATCAAAGAGAAAGCGTCAGCAAAGGCCTCCTTTAATTTCCTAA 1197 0.5021 MEQPLPLDSEDLQLDRVRSELALISSGSGSGISFIIGSEGSRSTTSSADISTIRTGSGNISGLLVSEPVQSPRLLDPAPSENMRATRDKCVGRNKKEVRWGFTSVIGRRREMEDAIAVVPGFMSLTCDHTGGCTAPGSKSSGEISPVHFFGVYDGHGGSQVANFCAKRMHEVIAEEWDREITDGKEWQGKWEAVFASGFEKTDSEIVTGAVAPEMVGSTAAVVVLSRCQIITSNCGDSRAVLYRGTQTIPLTVDQKPDRQDELLRIEGGGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPETTLTTRTDEDECLILASDGLWDVMTNAEVGEVARHILRRRRKSLSMEEISPAQVVADSLTEIAYSRHSRDNISIIVVDLKSKRKRQQRPPLIS 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1676 398 CDD PP2Cc 98 384 IPR001932 -
Glsi12g1676 398 Gene3D - 89 394 IPR036457 -
Glsi12g1676 398 Pfam Protein phosphatase 2C 102 377 IPR001932 -
Glsi12g1676 398 FunFam Protein phosphatase 2C 51 92 392 - -
Glsi12g1676 398 SUPERFAMILY PP2C-like 94 385 IPR036457 -
Glsi12g1676 398 ProSiteProfiles PPM-type phosphatase domain profile. 99 384 IPR001932 -
Glsi12g1676 398 PANTHER PROTEIN PHOSPHATASE 86 384 IPR015655 GO:0004722|GO:0006470
Glsi12g1676 398 ProSitePatterns PPM-type phosphatase domain signature. 149 157 IPR000222 GO:0043169
Glsi12g1676 398 SMART PP2C_SIG_2 129 384 IPR001932 -
Glsi12g1676 398 SMART PP2C_4 88 382 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1676 Glsi-ChrGlsi12 33318485 33323688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1676 100 394 PP2C-type Phosphatase Gene Family AT4G26080 50.794 5.37e-101 305