Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1661 ATGGCTGAGCTACCCAGCTCAGAAACAGAGATAAGCAGCAACTGGTCCGCACACCACCCATCATTATCTGGATCATCTCATTGTTTACCGAACTCCACTTCTAAGCCTTCACCCACAGAACACAAGAAGCTCAAACGGGCAAGAGATAACAGCAAACACCCGGTTTACCGGGGAGTCCGAATGCGGACCTGGGGCAAATGGGTATCCGAAATCCGAGAGCCCCGGAAGAAAAATCGGATCTGGTTAGGCACCTTTGCCACGCCGGAGATGGCCGCCCGTGCCCATGACGTGGCGGCACTCAGTATTAAAGGCAATTCGGCCATCCTCAACTTCCCGGAACTTGCGGGTTCACTGCCCCGACCCGCTTCGAACGCGCCCCGAGATGTTCAAGCTGCGGCTGCGAAGGCCGCTTCCATGGAGATATTTGGTCCCCCAATGACGTCTTCCTCTTCGTCATCTTCGTTGTCACAGTCTTCCTCGTCTTCGTCATTGGCAATATCGTCCTCCGCCGACCCGTCAACCCCAGAGGAACTGGGGGAGATAGTTGAGCTACCGCCTCTAGGAACCAGTTTCGAGTCGAGCAATGATTTCGTGTTTTTGGATCCGGTAGACGGGTGGCTCTATGCTCAGCCGTGTTATCACAGCATTTATGATGACAAGTATTGTGGGGGGTATTTCCTTGGGGACGAGACATCAATGCAAGAAACAGAGAGTCTGCTTATGTGTGGATTTGAGGGTTCGCTGTGGCAACATTAA 756 0.5317 MAELPSSETEISSNWSAHHPSLSGSSHCLPNSTSKPSPTEHKKLKRARDNSKHPVYRGVRMRTWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALSIKGNSAILNFPELAGSLPRPASNAPRDVQAAAAKAASMEIFGPPMTSSSSSSSLSQSSSSSSLAISSSADPSTPEELGEIVELPPLGTSFESSNDFVFLDPVDGWLYAQPCYHSIYDDKYCGGYFLGDETSMQETESLLMCGFEGSLWQH 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1661 251 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 37 190 - -
Glsi12g1661 251 MobiDBLite consensus disorder prediction 1 53 - -
Glsi12g1661 251 MobiDBLite consensus disorder prediction 1 37 - -
Glsi12g1661 251 CDD AP2 56 114 IPR001471 GO:0003700|GO:0006355
Glsi12g1661 251 FunFam Ethylene-responsive transcription factor 2 54 113 - -
Glsi12g1661 251 SMART rav1_2 55 118 IPR001471 GO:0003700|GO:0006355
Glsi12g1661 251 SUPERFAMILY DNA-binding domain 55 113 IPR016177 GO:0003677
Glsi12g1661 251 MobiDBLite consensus disorder prediction 38 53 - -
Glsi12g1661 251 Pfam AP2 domain 54 104 IPR001471 GO:0003700|GO:0006355
Glsi12g1661 251 PRINTS Ethylene responsive element binding protein signature 78 94 IPR001471 GO:0003700|GO:0006355
Glsi12g1661 251 PRINTS Ethylene responsive element binding protein signature 56 67 IPR001471 GO:0003700|GO:0006355
Glsi12g1661 251 Gene3D AP2/ERF domain 55 113 IPR036955 GO:0003700|GO:0006355
Glsi12g1661 251 ProSiteProfiles AP2/ERF domain profile. 55 112 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1661 Glsi-ChrGlsi12 33197307 33198062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1661 31 224 AP2-EREBP Transcription Factor Family AT5G11590 61.692 1.45e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi12g1661 AP2 6.5e-14 CL0081