Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1650 ATGACATTTGTTGCGTCCCATACGAGGACCACTGTGAAGCTCGTCACTGTGTCCTATATCAGCTACCATCTATGCTCTGCGTCTCCTTCTGCTGAGCTCCATGCTGCTCATCATCAAGCATTCTCACTGTCACTGGAAAAGTTGAAGACGAAAACGGCATTCTTTTTAAATTTTGGCATTGTTACTGGTGGGATTGGGCCATTAGATGGGCCCCGATTGAATGTCTTATATTTCGTTAGGCCCATTGTATATTTCAGCTTGAGGAACCAGAGTGACAGTTCCAAGTGGGCCCACATAAACAAAGGAATTGTGGACCGAGCTTCCATTGCACTTAGACCAATACATAAAGCGGACCAAATTACCCTCGCCTCTCGCTGTCACCGGGCAATTGCGCATCTGTCTCGCTCCCAAGTCTCCCTGTGGCTTTGGTTTCTCTTGTCCCATATACGCACAACCTTTTGCAATCTTCTCTGCTTGTTTTCAGATTCGGGTCGAAGAGTCGCAGAACCCTACCTTTTCTTTCATGCTCAGGTAGATTCCCAATCTATTTCCTTTGTAACATTCGTCATGGAACGAGTTGTCGGCGGCAAGTACAAGCTTGGTCGCAAGATCGGAAGCGGATCCTTCGGCGAAATCTATCTTGCTACGCATATTGATACCTTCGAGATCGTCGCTGTTAAGATCGAGAATAGTAAAACAAAGCATCCGCAATTGCTCTATGAGGCAAAACTGTACAATATTCTTCAAGGAGGAAGTGGAATTCCTAGCATAAAATGGTCTGGCGTGGATGGGGAGGAGAATGTGCTTGTTCTTGATTTGTTGGGACCGAGTCTTGAGGATCTGTTTGTGTATTGTGGAAGGAAGTTTTCATTGAAGACGGTATTAATGTTGGCTGATCAAATGATCAGCAGAATAGAATATGTGCATTCAAAGGGATTTTTACACAGGGATATAAAACCTGACAACTTTCTTATGGGACTTGGTCGGAAGGCTAACCAGGTTTACATAATTGACTTTGGCCTTGCGAAAAGATATCGGGACTCAACAACCAATCGCCACATCCCTTACAGGGAGAACAAAAACTTAACAGGGACTGCACGTTATGCAAGTTGCAATACTCATATTGGAATTGAGCAAAGTCGACGGGATGATTTGGAGTCACTAGGATATGTTCTTTTGTACTTCCTTAGAGGAAGCCTTCCTTGGCAAGGTCTAAAGGCTGCAACAAAGAAGCAAAAGTATGATAAAATATGTGAGAAGAAATTATCAACTCCTATTGAGGTCCTGTGCAAATCTCATCCTGTAGAGTTTGCTTCATACTTTCATTACTGCCATTCTCTGACATTTGATCAGCGACCTGATTATGGATTCTTGAGGCGGGTATTTCGGGACCTATTTACCCGAGAAGGTTATGAATCGGACTATGTATATGATTGGACCATCTTAAAGTATCAGCAGGCACAAAAAAATAGAGCTCAACTGCGCATACTTCCCGTTACTGGAGCAAGCAACAGCCGTGCAATGCCAATGGATGTTGACGACCATCAAGGGGATGTATCAGAGCGCATTAGATCAGGCAATGCTGCTGGTTCTGGTGTTAAATTGCAGTTTAAATCACCAGTGGACAAAAGTTTGATATCGGATAATCCTCTCAACAAAAATATTTTTGGAGAGGAAAATATGCCATCTACTTCATATACGCATTCTGCGAGGCAGTAA 1719 0.4346 MTFVASHTRTTVKLVTVSYISYHLCSASPSAELHAAHHQAFSLSLEKLKTKTAFFLNFGIVTGGIGPLDGPRLNVLYFVRPIVYFSLRNQSDSSKWAHINKGIVDRASIALRPIHKADQITLASRCHRAIAHLSRSQVSLWLWFLLSHIRTTFCNLLCLFSDSGRRVAEPYLFFHAQVDSQSISFVTFVMERVVGGKYKLGRKIGSGSFGEIYLATHIDTFEIVAVKIENSKTKHPQLLYEAKLYNILQGGSGIPSIKWSGVDGEENVLVLDLLGPSLEDLFVYCGRKFSLKTVLMLADQMISRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDSTTNRHIPYRENKNLTGTARYASCNTHIGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKLSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLRRVFRDLFTREGYESDYVYDWTILKYQQAQKNRAQLRILPVTGASNSRAMPMDVDDHQGDVSERIRSGNAAGSGVKLQFKSPVDKSLISDNPLNKNIFGEENMPSTSYTHSARQ 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1650 572 SUPERFAMILY Protein kinase-like (PK-like) 194 479 IPR011009 -
Glsi12g1650 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Glsi12g1650 572 ProSiteProfiles Protein kinase domain profile. 198 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g1650 572 SMART serkin_6 198 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g1650 572 Pfam Protein kinase domain 198 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g1650 572 ProSitePatterns Protein kinases ATP-binding region signature. 204 227 IPR017441 GO:0005524
Glsi12g1650 572 FunFam Casein kinase I isoform delta-like 190 529 - -
Glsi12g1650 572 Gene3D Transferase(Phosphotransferase) domain 1 177 516 - -
Glsi12g1650 572 MobiDBLite consensus disorder prediction 552 572 - -
Glsi12g1650 572 PANTHER CASEIN KINASE-RELATED 194 495 - -
Glsi12g1650 572 CDD STKc_CK1_delta_epsilon 197 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1650 Glsi-ChrGlsi12 33126001 33133058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1650 193 425 AGC Kinase Gene Family AT3G08720 26.471 9.01e-14 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Glsi12g1650 Pkinase 1.3e-27 CL0016