Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1635 ATGGGGGAACGTGAGGAGGGTGATTGCCCTTCGAAGAATGTATTATCGGATGCTGCTGTAGTAGCGTTGCCGTTGGATGTTCCCGCGAAGAAGCTGGCGAGGCAGCTCGATTTCACAGGTTTTGGTGGGGTGTCGGCGAGTGTGGCTTTGCCGGAACATCAGCAATTGCAACTGCAGCCTCAGGGATTGACACAGCAACCCGTGGTCGTGATGCCGGTGCCGTCGCAGGCTCCTCATTCTTCAGTGAGGGTTGGGAAACCAGAATCTCCAAAATCAAGATCAAGATCCAACTTTGAAATGAAAGACTCTACTCCAAAGAAGCAAAAACAGTGCAATTGTAAACACTCAAAATGCTTGAAGTTATACTGTGAATGTTTTGCATCGGGTATACATTGTGATGGGTGCAACTGTGTAAATTGTTATAACAATGTTGAAAATGATGCTGCTAGACGAGAAGCTGTTGAAGCTACTTTAGAGCGCAATCCAAATGCATTTAGACCGAAAATTGCAAACAGCCCTCATGGAACACACGATAGCAGGGAGGAGACTGGGGAAGTTCTAATATTAGGAAAGCACAACAAGGGTTGCCACTGTAAAAAATCAGGGTGCCTTAAAAAGTACTGTGAATGCTTTCAAGCCAACATTCTTTGCTCTGAAAATTGCAAATGCATGGACTGCAAAAATTTTGAGGGAAGTGAAGAGAGACAGGCTTTGTTCCATGGAGATCAAAATAACAATATGGCATATATTCAGCAGGCAGCAAATGCTGCCATAACTGGAGCTATTGGATCCTCTGGTTATTCATCCCCTCCAGTATCCAAGAAAAGAAAAGGTCAGGAACTCTTCTTTGGGCCAACAGCCAAGGATCCATCCATTGGCAAGCTTGGGCAATTTCAACAGGTAAATCTTGTCAGAGGTCCTGCACCCTCCTCATCCTTGTCTTCTGTCACTGGTGCTCGTACTGGAAATGTCACATTAGGCCCTTCAAAATTTACGTACAGGTCTCTTTTAGCAGACATCATACAACCACAGCACTTGAAGGAGCTTTGCTCAGTTCTAGTGCTGGTATCAGGACAAGCTGCAAAGACACTCTCAGACCAGAAAACAGGAATGGACAAACATAGTGAAGATCAGACAGAAACTTCCCTTGCTTCTTCAACTCAAGAGCAATTGCCAAGTCAGAAGGAAATTGATGTTAAGAAAACTATGGCTGATGATTGTTTGAGTGCAAACCAAACTGATAAAATCAGCCCAGATGATTCCAGTTCAGATGGTGCAGATGCCCCAAAAGGGAGGCCAATGTCTCCTGGAACTCTAGCCTTGATGTGTGATGAGCAAGATACAATGTTCGTGACAGCTCCCTCTCCTAATGGTTCAATGGCCCATGCCTGCAACAAATCTTCACAGTCTCCTTATGGACAAGGCTGGACAGAGGTTCATGCAGAGCAAGAAAGGATTGTATTGACAAAGTTTAGAGATTTTCTAAATAGGGTTATCACTATGGGAGAAATAAATGAAACAAAATGTTCTTCATTAGCCAGAAGTGAATTAGAGACTCAAAAGGACCCAATCAGCAATGGCGTTGGGAATGTAAGTACTGAGACAGCACATCAGCAGGGAGCCACCAGTAATGGTGTTGCCAAAGCTGTTGTCCCTCCCATGGCCACAAGTATGAACATGATAACTTCAGCAGCTTATATCCCTAGTAATCTTGTTACCGAAAACGGGGAATACAAGCCGAAGATTGAAAAGGAGATATGA 1761 0.4429 MGEREEGDCPSKNVLSDAAVVALPLDVPAKKLARQLDFTGFGGVSASVALPEHQQLQLQPQGLTQQPVVVMPVPSQAPHSSVRVGKPESPKSRSRSNFEMKDSTPKKQKQCNCKHSKCLKLYCECFASGIHCDGCNCVNCYNNVENDAARREAVEATLERNPNAFRPKIANSPHGTHDSREETGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMAYIQQAANAAITGAIGSSGYSSPPVSKKRKGQELFFGPTAKDPSIGKLGQFQQVNLVRGPAPSSSLSSVTGARTGNVTLGPSKFTYRSLLADIIQPQHLKELCSVLVLVSGQAAKTLSDQKTGMDKHSEDQTETSLASSTQEQLPSQKEIDVKKTMADDCLSANQTDKISPDDSSSDGADAPKGRPMSPGTLALMCDEQDTMFVTAPSPNGSMAHACNKSSQSPYGQGWTEVHAEQERIVLTKFRDFLNRVITMGEINETKCSSLARSELETQKDPISNGVGNVSTETAHQQGATSNGVAKAVVPPMATSMNMITSAAYIPSNLVTENGEYKPKIEKEI 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1635 586 MobiDBLite consensus disorder prediction 410 439 - -
Glsi12g1635 586 ProSiteProfiles CRC domain profile. 107 231 IPR005172 -
Glsi12g1635 586 MobiDBLite consensus disorder prediction 86 103 - -
Glsi12g1635 586 MobiDBLite consensus disorder prediction 365 396 - -
Glsi12g1635 586 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 194 228 IPR005172 -
Glsi12g1635 586 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 108 143 IPR005172 -
Glsi12g1635 586 PANTHER TESMIN/TSO1-RELATED 59 504 IPR028307 -
Glsi12g1635 586 SMART CXC_2 106 146 IPR033467 -
Glsi12g1635 586 SMART CXC_2 191 232 IPR033467 -
Glsi12g1635 586 MobiDBLite consensus disorder prediction 75 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1635 Glsi-ChrGlsi12 33016583 33022862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1635 27 539 CPP Transcription Factor Family AT4G29000 55.963 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Glsi12g1635 TCR 3.1e-12 No_clan