Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1618 ATGGAAAACAGACTCAAAATGCGAATCTCTCGCATGTTCAGATCCTCATTCGGGTCTTGCCGGACCCGAAACTTATCAGACGTTGCGGAAAAAGCAGTCTTTGCCCCGCAGAACCACCGAGGCTTCCAGCTCATAGAGCCCTTGTCCCCTAAAGCTCGTCCCTTTCCATCCATATGTAGACCCAAAGCGTCCGAAACATCCGACACCATTGATGACCGGTGTATCGTATCGGTTAAGGAGTCGCTCCCGAGAAGGAAAGTTTCGGAGTGGTCGTCCCCGTTCATCTGGGGCAGTCTCGATGGTAGGTCGTGTCCCCCTGCTTCGCCAATCACACCCTTGAATACAATCTACGAGAACGAGTTCGGTTATGGTGACAAAGTGAGAAATTCAGTGAGAAATAAAAGGTATAAGAAGACAAAGAAGAAGAAGAAGGATGCCCAGAAGAAAAGAAAGCCCTCAGATATGATCCCATTTAACTCTTGTGCTCAAGACGCAAACTTTGGCGGGTATTGGTGGTATAGCAGCGAAGAAGACGACGCAGGAGAGGATGAAACTGAAACCCTTTTCTCTTCTAAAAGCCTCTCTTCCGATTCCTCCAGGTCTCACCGCCGGCATCGTTCTCGTCGGAAAAAACACGACAGTGGCCGAGTGGCTTCTGGGAATCGGAGTTCTGAAATGGGTGTTCTCCCATTGCAGGGGAAAGTGAAGGATACCTTCGCCGTCGTGAAGCGCTCCAGGGATCCCTACAATGATTTCAGGACGTCAATGGTAGAAATGATAGTTGAAAAAAGGATATTTGCGCCCAGGGATTTGGAGAATCTCTTGCAGTGTTTCCTGTCACTGAATTCGCATAATCATCATAAGATTATTGTTGAGGTTTTCACAGAGATTTGGGAAGCTCTATTCCCTGACTGGCTTTGA 921 0.481 MENRLKMRISRMFRSSFGSCRTRNLSDVAEKAVFAPQNHRGFQLIEPLSPKARPFPSICRPKASETSDTIDDRCIVSVKESLPRRKVSEWSSPFIWGSLDGRSCPPASPITPLNTIYENEFGYGDKVRNSVRNKRYKKTKKKKKDAQKKRKPSDMIPFNSCAQDANFGGYWWYSSEEDDAGEDETETLFSSKSLSSDSSRSHRRHRSRRKKHDSGRVASGNRSSEMGVLPLQGKVKDTFAVVKRSRDPYNDFRTSMVEMIVEKRIFAPRDLENLLQCFLSLNSHNHHKIIVEVFTEIWEALFPDWL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1618 306 ProSiteProfiles OVATE domain profile. 241 300 IPR006458 -
Glsi12g1618 306 MobiDBLite consensus disorder prediction 131 148 - -
Glsi12g1618 306 MobiDBLite consensus disorder prediction 128 160 - -
Glsi12g1618 306 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 114 302 IPR038933 GO:0045892
Glsi12g1618 306 MobiDBLite consensus disorder prediction 184 227 - -
Glsi12g1618 306 NCBIfam uncharacterized plant-specific domain TIGR01568 239 302 IPR006458 -
Glsi12g1618 306 MobiDBLite consensus disorder prediction 199 215 - -
Glsi12g1618 306 Pfam Transcriptional repressor, ovate 245 302 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1618 Glsi-ChrGlsi12 32914901 32915821 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Glsi12g1618 Ovate 1.3e-25 No_clan