Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1612 ATGAGTGTGATTGGGAGACAGATGCCACGATCTAATTCGGCTGTGCACCATCAGCGTCAAAAATCTGACAACTTCCTCGATGCAACCTCTCACGGCAGATGGTTTCAATCTTCCACTTTGACGCAGGAGTTTGGTTCTTATGATGGAGGAGTACTTACGGGGATGGCTGATTCTCCATCTTCCAGCTTGAGGAAGAACGATGATGATCAAGTCTTGCCCACTGGGTTCACCCATGGCCTGTTTGATCTTCATTCCTTCGATACCGAGCTTTTGCCCGAGATGTCTAATATTCAAGATGAATATTTGATCAATCAAGCGGTTCGTGGTCAAAGTTTTGATGTCTCTGAGCCATTTCTTTCCACCAGCAAATTTGTAAACAAGACACGAGGCTTGCCTGAGAACAATGTTCTTGGAAGTTTCTCAGCAGATAAAGAGAGAACAAACAATGTTGCTAAGATCAAAGTTGTGGTACGCAAGAGGCCAATAAATAAGAAGGAAATAGCGAAGAAAGAGGAAGATATTATTACTATAGATTCAAATTCTCTCACAGTTCATGAAAGAAAACTCAAGGTTGATTTAACAGAATATATTGAGAAACATGAGTTCGTTTTTGATGCTGTGCTGAGTGAAGATGTTTCAAATGATGAAGTGTATGCTGAGACTGTAGAACACATAGTTCCTCTGATTTTCCAACGAACAAAAGCAACTTGCTTTGCATATGGCCAAACAGGGAGTGGAAAGACTTATACCATGCAACCACTGCCTCTCAAAGCATCCCAAGATATTTTAAGATTAATGCACCATACGTACCAGAACCAAGGTTTTCAATTGTTTGTTAGTTTCTTCGAAATATATGGGGGAAAACTTTTTGATCTCCTTAATGATCGAAAAAAACTTTGCATGAGGGAGGATGGGAAACAACAGGTTTGCATTGTTGGGTTGCAAGAATACAGAGTATCTAATGTTGAGACAATCGAGGATTTTATTGAGAGAGGAAATGCTACAAGAATTACTGGTACAACTGGTGCAAATGAGGAATCCTCTCGATCACATGCTATACTTCAGCTTTGTGTAAAGAGATCAGCTGATAAGATTGAATCAAAGCCTGCTCGAGTTGTAGGCAAGCTATCTTTCATAGATCTTGCAGGAAGTGAACGTGGTGCTGATACTACAGACAATGATAAGCAGACAAGGATCGAAGGTGCTGAAATTAATAAAAGTTTACTTGCTTTAAAAGAATGCATTAGAGCTCTAGACAATGACCAGGGGCATATCCCTTTCAGAGGAAGCAAATTGACTGAGGTTTTGAGAGATTCTTTTGTTGGTGATTCTCGCACCGTAATGATATCATGCATTTCCCCTAGCTCAGGTTCATGTGAACACACTCTTAACACATTAAGATATGCCGACAGGGTGAAGAGTTTATCTAAAGGGAACAGCACCAGAAGGGATCCCCTTTCTTCATCTTCTAACCTTGGAGACTCAACCGCATTGCCTTCTTCAGTTTTATCTTCTGAAGGAACTTTTGACGAAGAAATAAATTACATTTCCTGTGAGAGGAACCGATTTGGTTGGTCTAAACAACTTGAAAGAGAATCCTCTCCACCAATTAATGTGGATCGTGCTGGAAGTGGTAGAATGGGGGGAAATTTTGCCGCATTGTATTCAGACTCTCAAAAGGGTCATAGAGGCGGTCAAAATGACAAAGTTGATAATGAAACTAGTTACCTTGGACAGACGTATGATTATAAACAAGACAGAACCCGAAAGACAAGTAAGAAGGGAGATATTAACGAATTATCAGCTGTGGAGGACAAGAGGAAGACAGACTATCATGCGAAACGTGTGGAACTGCCTCATTTTTTGGTTGATTGTTCTAATCCTGACAATGATTTAAACGCCCTACTGAAGGAAGAGGAAGATCTCGTAACTGCTCACAGGAGACAAGTGGAGGAGACAATGGAAATTGTAAGGGAGGAGATGAATCTACTCGTTGAAGCTGATCAACCAGGAAACCAAATGGATGATTATATTTCTAAATTAAATGTCATTTTGTCACAGAAAGCTGCAGGAATTCTTCAATTGCAGACGCAGTTGGCTGAATTTCAGAGACGTTTGAAAGAGTATAATGTTTTGGCATCTTTGGGTAACTGA 2154 0.4034 MSVIGRQMPRSNSAVHHQRQKSDNFLDATSHGRWFQSSTLTQEFGSYDGGVLTGMADSPSSSLRKNDDDQVLPTGFTHGLFDLHSFDTELLPEMSNIQDEYLINQAVRGQSFDVSEPFLSTSKFVNKTRGLPENNVLGSFSADKERTNNVAKIKVVVRKRPINKKEIAKKEEDIITIDSNSLTVHERKLKVDLTEYIEKHEFVFDAVLSEDVSNDEVYAETVEHIVPLIFQRTKATCFAYGQTGSGKTYTMQPLPLKASQDILRLMHHTYQNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSNVETIEDFIERGNATRITGTTGANEESSRSHAILQLCVKRSADKIESKPARVVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNSTRRDPLSSSSNLGDSTALPSSVLSSEGTFDEEINYISCERNRFGWSKQLERESSPPINVDRAGSGRMGGNFAALYSDSQKGHRGGQNDKVDNETSYLGQTYDYKQDRTRKTSKKGDINELSAVEDKRKTDYHAKRVELPHFLVDCSNPDNDLNALLKEEEDLVTAHRRQVEETMEIVREEMNLLVEADQPGNQMDDYISKLNVILSQKAAGILQLQTQLAEFQRRLKEYNVLASLGN 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1612 717 MobiDBLite consensus disorder prediction 1 15 - -
Glsi12g1612 717 Coils Coil 692 712 - -
Glsi12g1612 717 PRINTS Kinesin heavy chain signature 425 446 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi12g1612 717 PRINTS Kinesin heavy chain signature 341 358 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi12g1612 717 PRINTS Kinesin heavy chain signature 375 393 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi12g1612 717 PRINTS Kinesin heavy chain signature 232 253 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi12g1612 717 SMART kinesin_4 150 481 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi12g1612 717 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 475 IPR027417 -
Glsi12g1612 717 CDD KISc_KIF2_like 152 473 - -
Glsi12g1612 717 FunFam Kinesin-like protein 134 478 - -
Glsi12g1612 717 ProSiteProfiles Kinesin motor domain profile. 152 475 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi12g1612 717 MobiDBLite consensus disorder prediction 1 21 - -
Glsi12g1612 717 MobiDBLite consensus disorder prediction 474 503 - -
Glsi12g1612 717 ProSitePatterns Kinesin motor domain signature. 374 385 IPR019821 GO:0003777|GO:0005524|GO:0007018
Glsi12g1612 717 MobiDBLite consensus disorder prediction 479 503 - -
Glsi12g1612 717 Pfam Kinesin motor domain 158 474 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi12g1612 717 Coils Coil 647 667 - -
Glsi12g1612 717 Gene3D Kinesin motor domain 134 478 IPR036961 -
Glsi12g1612 717 PANTHER KINESIN-RELATED PROTEIN 6 60 712 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1612 Glsi-ChrGlsi12 32875323 32880533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1612 151 475 Calmodulin-binding Proteins AT5G65930 34.925 3.17e-43 166