Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1604 ATGGCTGATCTCTCCAACGGCCACGCTCGTATTCCCTCCATCACCTTCACCAAGCTCTTCATCAATGGACACTTTGTTGATTCCGTTTCAGGAAAGACGTTTGAGACTATAGATCCAAGAACAGGAGACGTGATTGCGAAGATTGCCGAAGGAAACAAAGATGATATTGATGTTGCCGTAAAGGCAGCACGTGAGGCCTTTGACTCAGGTCCATGGCCACGCTTGCCCGGCGCTGAGAGAGCAAAAATTATGATGAAGTGGGCAAACCTAATTGATGAAAACATTGAAGAACTAGCAGCATTGGATGCCATTGATGGGGGCAAGCTATACCATTGGTGTAAGGCTGTGGACATTCCTCAAATAGCCAATACTCTGCGTTACTATGCTGGTGCTGCCGATAAAATTCACGGGGAGGTGTTAAAAATGTCAGGAGAGTTCCATGCGTACACGCTGTTGGAACCAATCGGTGTTGTGGGACACATCATTCCCTGGAACTTTCCTAGTACCATGTTCTTCGCCAAGGTTAGCCCTTCCTTAGCTGCCGGCTGCACCATGATCCTTAAACCTGCAGAGCAAACACCTCTCTCGGCTCTATTTTATGCTCATCTTGCTAAGCTGGCTGGAATTCCAGATGGTGTGCTCAATGTAGTCCCAGGATTTGGCTCAACTGCTGGTGCTGCAATCAGCTCACATATGGACATTGATGCGGTCAGTTTTACTGGTTCAACAGAAGTAGGGCGCAAAGTGATGCAGGCTGCAGCTATGAGTAATCTGAAACCGGTTTCACTTGAATTAGGGGGTAAATCACCCCTCATAATATTTGATGATGCTGATGCGGACAAAGCTGCGGAGCTTGCACTCTTGGGCGTCTTGTTTAACAAGGGAGAAATATGTGTTGCAGGTTCCCGTGTGTTTGTCCAGGAAGGTATATATGATGAATTTGAGAAGAAGTTGGTGGAGAAGGCAAAAGCTTGGGTAGTTGGGGACCCTTTGGATCCTAAAGTTCAGCAAGGACCTCAGGTTGACAAGAAGCAATTTGAAAAAATTATTTCGTATATTGAGCATGGAAAGAGAGAAGGAGCGACCCTTTTGACTGGGGGCAAAGCAGTGGGCAACCGAGGATACTACATTCAACCTACAGTGTTCAGTAATGTTAAGGAGGACATGCTTATAGCACGAGACGAAATATTTGGGCCCGTGATGGCACTGATGAAGTTTAAGACAGTGGAGGAAGCAATTAGGAGTGCCAACAATACCAGATATGGACTAGCAGCGGGGATTGTGACAAATAATTTGGATACAGCAAACACAGTGTCAAGATCCATCCGCGCGGGCATTATTTGGATCAACTGCTATTTTGCCTTTGGAAATGACGTTCCTTATGGAGGATATAAGATGAGTGGATTTGGAAGAGATTTTGGATCGGAAGCCCTTCACAAGTACCTCCAAGTTAAATCTGTTGTCACTCCCATCTACAATTCTCCTTGGCTTTGA 1494 0.4598 MADLSNGHARIPSITFTKLFINGHFVDSVSGKTFETIDPRTGDVIAKIAEGNKDDIDVAVKAAREAFDSGPWPRLPGAERAKIMMKWANLIDENIEELAALDAIDGGKLYHWCKAVDIPQIANTLRYYAGAADKIHGEVLKMSGEFHAYTLLEPIGVVGHIIPWNFPSTMFFAKVSPSLAAGCTMILKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGSTAGAAISSHMDIDAVSFTGSTEVGRKVMQAAAMSNLKPVSLELGGKSPLIIFDDADADKAAELALLGVLFNKGEICVAGSRVFVQEGIYDEFEKKLVEKAKAWVVGDPLDPKVQQGPQVDKKQFEKIISYIEHGKREGATLLTGGKAVGNRGYYIQPTVFSNVKEDMLIARDEIFGPVMALMKFKTVEEAIRSANNTRYGLAAGIVTNNLDTANTVSRSIRAGIIWINCYFAFGNDVPYGGYKMSGFGRDFGSEALHKYLQVKSVVTPIYNSPWL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1604 497 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 263 270 IPR029510 GO:0016491
Glsi12g1604 497 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 21 283 - -
Glsi12g1604 497 SUPERFAMILY ALDH-like 12 493 IPR016161 GO:0016491
Glsi12g1604 497 FunFam Aldehyde dehydrogenase3 267 456 - -
Glsi12g1604 497 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 456 IPR016163 GO:0016620
Glsi12g1604 497 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 291 302 IPR016160 GO:0016491
Glsi12g1604 497 Pfam Aldehyde dehydrogenase family 25 487 IPR015590 GO:0016491
Glsi12g1604 497 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 9 487 - -
Glsi12g1604 497 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 21 485 IPR016162 GO:0016491
Glsi12g1604 497 FunFam Aldehyde dehydrogenase, putative 459 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1604 Glsi-ChrGlsi12 32831084 32834165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1604 10 497 Aldehyde Dehydrogenase Gene Family AT3G24503 72.393 0.0 747