Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1601 ATGGAAGATATTGAAGATGATGCAAGGTACCCTCCAAAGCCCTACTCTTTGAGTCGTAATAACCCTTCTCAACGCCAGAAACATCCAATTCGAGGTATACCTTATCATCGCCCAATAACCAGTCGATATGAGGTAGACGATGAAATCGAAGAAGATGAAGAATTGGATGGATATGATGTAGGGAATGTCCTAGAGGACGACGATGAGGAGGACCAAGATGATGGGGAAAATGGCTATGGTGGGACTTTCGAAGACGGTGACGAGTTTGAGAAAAACCCCAAAAAGAGAAGATTGCCACGTTCTTCGGTTTCGAGCTATGAGTTTGCTCCTCGTGTGAAATTTTCATATGGGAGTCGAAATTCAGCAGATGAATGGACCGAGCACGCGACATTTGTGCTGTTAGAGGTTTGGGGGGATAAATTTCTTCAACTCGGGAGGAAGAGTTTAAGGTCTGAGGATTGGCGTGATGTAGCCGAGAAAGTTTCTGAAGAAGTGAAGATGGAAAGGACAGAGGTCCAGTGTAGGAATACGTTGGATAAATTGAAAAGAAGGTACAAGAAAGAAAAGGCGAAGATGGATGAAATGGGGTTGAATTCGAGTAAATGGGCTTATTTTAAGAAGATGGATATGTTGATGGCCTCATCAGCGAGGCAAGAATATGGGCTAGCCTGCGGGGTTGATTGTGGCGAGTATGTTTTCATGAATACAAGGGTTTATTTAAATCGGTCGAATGGCTTTGATGAGATGAGAGATAGTCCTGGGGAATCAGAGACGTCTGAAGAGAATGATTTGGATGGGCTTCCACCGAGGAGGACTGGGATTGGAGGAGACGAGGAGGGGGAGTCGTCATTTAGGGTGCTGGCAGATTCTATTCAAAAGTTTGGGAAGATATATGAGAAAATCGAGAGTAGTAAGAGGCAGCAGATGATGGAGCTAGAGAAGATGAGGATAGATTTCAATAGGGAGTTAGAGCTTCAGAAGAAGCAGATTTTGGAAAGGGCCCAAGCTGAAATTGCAAAATTACAGGAAGGAGATGAGGAAGACACTGACGCATCTGCAGAGGATCTCAGTGAATGA 1077 0.4438 MEDIEDDARYPPKPYSLSRNNPSQRQKHPIRGIPYHRPITSRYEVDDEIEEDEELDGYDVGNVLEDDDEEDQDDGENGYGGTFEDGDEFEKNPKKRRLPRSSVSSYEFAPRVKFSYGSRNSADEWTEHATFVLLEVWGDKFLQLGRKSLRSEDWRDVAEKVSEEVKMERTEVQCRNTLDKLKRRYKKEKAKMDEMGLNSSKWAYFKKMDMLMASSARQEYGLACGVDCGEYVFMNTRVYLNRSNGFDEMRDSPGESETSEENDLDGLPPRRTGIGGDEEGESSFRVLADSIQKFGKIYEKIESSKRQQMMELEKMRIDFNRELELQKKQILERAQAEIAKLQEGDEEDTDASAEDLSE 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1601 358 Coils Coil 171 198 - -
Glsi12g1601 358 MobiDBLite consensus disorder prediction 339 358 - -
Glsi12g1601 358 MobiDBLite consensus disorder prediction 84 101 - -
Glsi12g1601 358 MobiDBLite consensus disorder prediction 1 102 - -
Glsi12g1601 358 MobiDBLite consensus disorder prediction 248 282 - -
Glsi12g1601 358 Pfam Myb/SANT-like DNA-binding domain 123 210 IPR044822 -
Glsi12g1601 358 Coils Coil 309 340 - -
Glsi12g1601 358 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 101 345 IPR044823 -
Glsi12g1601 358 MobiDBLite consensus disorder prediction 45 83 - -
Glsi12g1601 358 Gene3D - 125 187 - -
Glsi12g1601 358 MobiDBLite consensus disorder prediction 247 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1601 Glsi-ChrGlsi12 32820777 32821853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1601 123 347 Trihelix Transcription Factor Family AT1G54060 31.835 5.64e-23 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi12g1601 Myb_DNA-bind_4 1.3e-19 CL0123