Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1598 ATGGCTACCCCACACGCTGTGAACTTCTCGGCGCCAAGAGGGTTTCTCACCAAATTCAAATCTGGAGTTAAAGAAACACTCTTCCCCGACGATCCATTCAGGCAGTTCAGGAATGAAAATAAGCCTATCCGCAGAGTGATTAAAGGCGTCCAATACTTTGTCCCAATCTTCGATTGGCTTCCCAATTACACTTTCCGTCTTTTTCTCTCTGACTTTCTTGCAGGCCTCACGATCACCAGCCTCGCTATCCCTCAGGGCATAAGCTATGCCAAACTCGCCAACCTTCCTCCCATCATCGGCCTCTATAGCAGTTGTATCCCCCCTCTTATTTATGCCATTTTCGGGAGCTCAAGGCACGTTGCGGTGGGGACGATAGCAGCAGCCTCGTTGATTGTATTTGCAAACATTTCGAGTGTGGCATCGCCGGATACCAACCCAACGTTGTACCTTCATTTGGTTTTCACAACCACCTTTGTCACTGGGGTCTTCCAGGCTTCTTTAGGTATTCTAAGGCTAGGGATATTGGTGGACTTCTTTTCTCATTCAACCATCACTGGCTTCATGGGCGGGACTGCAATACTTCTAATCCTGCAGCAACTGAAGGGCATATTTGGCTTGAAACATTTTACAACCAAAACCAGCGTAGTAGAAGTGTTGAAGTCCATCTGGACCTTCAGATCTGAGATAAGGTGGGAGACTACCGTCCTTGGTGTGGTCTTTATTCTTTTCTTGCAGTTCACTAGGTATCTGAGGCAGAGAAATCCAAAACTCTTTTGGGTATCAGCTATAGCTCCAATGACAACAGTAGTGGTTGCTGGTGTTTTTACCTTCCTCGTAAAAGGCCAAGAGCATGGAATTCAAATTGTGGGTCACCTCGATAGAGGAGTGAATCGTCCATCCATCCAGTATTTAAATTTTGACTCTCAATATTTACCAGTAGTGTTGAAAGCTGGGCTTATCACAGGCATTTTGTCCTTGGCGGAAGGGATAGCAATAGGAAGAAGCTTTGCTGTGGTTGATAATACCCCTCATGATGGAAACAAGGAGATGATAGCATTTGGGTTGATGAACTTATGCGGTTCTTTCACTTCGTGCTACTTGACGAGCGGGCCATTTTCGAAAACTGCCGTGAATTACAACGCAGGGTGTAAGACAGCGATGTCAAACGTAGTACAGGCAGCACTAATGGCACTCACACTCGAATTTTTTGCTCCTCTCTTCGGCTACACCCCTCTCGTAGCCTTATCTTCCATTATTATATCAGCAATGCTTGGCCTCATCAACTACACAGAAATGATTCACCTCTTCAAAGTTGATAAGTTTGATTTCGTGATTTGCATGGCCGGCATGTTAGGGGTGGTCTTTATCAGCATGGATATGGGCCTCCTAATGTCTGTGGGACTCGGTGTACTGAGAGCACTCTTGTACGTGGCTAGACCTGCCACCTGTAAGCTCGGCAAGTTACTTGACTCAAACCTATACCGTGATGCGGAGCAGTATCCGGTTTCAACCAGGAATCAAGGCCTTCTAATTATACAACTTGGTTCTCCTATTTACTTTGCAAATTCCATTTACGTCAAAGAAAGGATTATGAGATATATCCAAGGTGAGCAGAGCTATGGAGATGATGTTATTCAGCATATCATACTGGATTTGTCAGGGGTAACATCGATTGATGTGACTGGTATCCAAGGATTGTTGGAGACGCGAAGAATCTTGGAAAAAAATGAAATTGAGATATCAATCGTAAACCCAAGGATGGAGGTTATGGAGAAGTTAATAGCATCAAAGTTTGTGGACAAGATTGGGAAGGAGTCTTTCTACTTGACTTTGGATGATGCAGTGATGGCAACTCAATATTCACTCCGCAAATCCAAGGCAAATGACTGGGTTGATCAGGATTCGCCTGCCCAGTAA 1917 0.4491 MATPHAVNFSAPRGFLTKFKSGVKETLFPDDPFRQFRNENKPIRRVIKGVQYFVPIFDWLPNYTFRLFLSDFLAGLTITSLAIPQGISYAKLANLPPIIGLYSSCIPPLIYAIFGSSRHVAVGTIAAASLIVFANISSVASPDTNPTLYLHLVFTTTFVTGVFQASLGILRLGILVDFFSHSTITGFMGGTAILLILQQLKGIFGLKHFTTKTSVVEVLKSIWTFRSEIRWETTVLGVVFILFLQFTRYLRQRNPKLFWVSAIAPMTTVVVAGVFTFLVKGQEHGIQIVGHLDRGVNRPSIQYLNFDSQYLPVVLKAGLITGILSLAEGIAIGRSFAVVDNTPHDGNKEMIAFGLMNLCGSFTSCYLTSGPFSKTAVNYNAGCKTAMSNVVQAALMALTLEFFAPLFGYTPLVALSSIIISAMLGLINYTEMIHLFKVDKFDFVICMAGMLGVVFISMDMGLLMSVGLGVLRALLYVARPATCKLGKLLDSNLYRDAEQYPVSTRNQGLLIIQLGSPIYFANSIYVKERIMRYIQGEQSYGDDVIQHIILDLSGVTSIDVTGIQGLLETRRILEKNEIEISIVNPRMEVMEKLIASKFVDKIGKESFYLTLDDAVMATQYSLRKSKANDWVDQDSPAQ 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1598 638 CDD STAS_SulP_like_sulfate_transporter 500 611 - -
Glsi12g1598 638 SUPERFAMILY SpoIIaa-like 504 615 IPR036513 -
Glsi12g1598 638 PANTHER SULFATE TRANSPORTER 17 620 IPR001902 GO:0016020|GO:0055085
Glsi12g1598 638 ProSiteProfiles STAS domain profile. 499 618 IPR002645 -
Glsi12g1598 638 ProSitePatterns SLC26A transporters signature. 97 118 IPR018045 GO:0008271|GO:0008272
Glsi12g1598 638 Pfam Sulfate permease family 68 448 IPR011547 GO:0016020
Glsi12g1598 638 NCBIfam sulfate permease 55 614 IPR001902 GO:0016020|GO:0055085
Glsi12g1598 638 Pfam STAS domain 500 614 IPR002645 -
Glsi12g1598 638 Gene3D STAS domain 479 621 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1598 Glsi-ChrGlsi12 32807791 32811470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1598 5 626 Inorganic Solute Cotransporters AT5G19600 61.897 0.0 788