Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1596 ATGAAGAACACAGTCTGCTTCCATTTTTCACTCCTCCTCACTTCCTTCTTTCTAGCCACACTATCTCTCTCTGCCTCCCAGCATGTCCCCATTACCACCCATGGAGCTCTGTCTCACGCCGAGGCCATATACATCAGGCAACGTCAGCTTCTCTACTACAGGGACGAGTTCGGTGATAGAGGAGAGAACGTCTCCGTAGACCCATCCTTGGTTTTCGAAAATGATCGTATCAGAAACGCCTATATAGCTTTACAAGCTTGGAAGCAAGCCATTCTTTCTGATCCCCAAAATCTCACTACTAATTGGGTTGGACCCAATGTCTGCGACTACACCGGGGTTTATTGTGCTCCTGCGCCCGACAATCCCAAAATCCGTACCGTAGCCGGCATTGACCTTAACCATGGTGACATTGCTGGGTACTTGCCCGAAGAGCTTGGGCTTCTCGTGGATCTTGCTCTATTCCATATCAACTCCAACAGGTTCTGTGGTACTATTCCCCACAAGTTTGATAGACTAAAATTGCTCTTCGAATTGGATATCAGTAACAATAGGTTCGCCGGCAAGTTCCCGGAGGTGGTTCTGAGGCTCCCCTCCCTCAAGTTTTTGGATCTGAGATTCAATGAATTCGAAGGGACTGTTCCCAAAGAACTTTTCGACAAGGATCTGGATGCGATCTTCATCAACGACAACCGGTTTGTGTTCGATCTTCCAGCTAATTTTGGGAACTCTCCGGTGTCAGTTATCGTCGTCGCTAACAACAGGTTCCACGGCTGCATTCCGGCGAGCTTGGGCAATATGTCAAACCTTAACGAGATCATTCTGATGAACAATGCCTTCCGTTCGTGCTTGCCTTCAGAGATTGGGTTGCTGAAGAACTTGACGGTGTTCGATGTAAGCTTTAATCAGCTACTGGGCCCCTTGCCAGACACCATTGGAGGCGTGGTGAGCCTCGAGCAGTTGAATGTAGCTCACAATATGCTTTCTGGTAAAATTCCAGCTAGCATTTGTATGCTACCGAATCTTCAGAACTTCACGTACTCTTATAACTTCTTCACTGGAGAACCACCGGCATGCTTGGCCTTGCCATCATTCGACGACCGGAGGAATTGCTTGCCGTCGAGGCCATTGCAGAGGTCAGCGGCACAATGTAAGTCGTTCTTGTCTAAGCCGGTGGATTGTAACTCGTTTAAATGTAAGCCATTTGTTCCTTCGCCCCCGTCTGTAGTGGTTCCATCACCCCCTCCACAAATTTCACCTCCGGCACCCGTTGTTTCACCTTCTCCACCTGTTTATATTCCACAGTCTCCTCCTCCACCCCCACCATCAGTTTACTCTCCGCCTCCTCCTTCACCCCCACCACCGGTTTATTCACCACCCCCACCTGTCTATTCTCCGCCGCCTCCTCCACCCTCTCCACCGCCCCCGGTCTATTCTCCGCCGCCTCCTCCACCCTCTCCACCGCCCCCACTCTATTCTCCGCCACCTCCTCCCCCCTCTCCACCGCCACCAGTCTATTCTCCGCCACCTCCTCCACCCTCACCACCCCCACCAGTCTATTCTCCGCCACCTCCTCCACCCTCACCCCTACCGTCTCCATCTCCACCACCATCGTCACCCGCTCCAACGCCTCCCTATTGTGTCCGGTCTCCACCACCTCCACATCCGAATTCCCCACCGCCGCCGGCTCCTATATTCTCCCCACCCCCACCTATCACATACCATTATAGCTCGCCGCCGCCATCACAGCATTCACCTCCACCTCCTCACTCGCCTCCCCCACCTATTTATCCCTATATATCACCGCCACCTCCGCCTCTTCTTATTCATTCTTCTCCTCCCCCGGTCCATACTCCACCACCACCGTCTCCGCTGCCTTGTATAGAACCACCTCCACCTCCATCCCCACCACCTTGTGAAGAGCATTCACCTCCACCGCCTTCTCCCGTGCCTTACCGGCCACCACCATCCCCATCTCCTCCGCCACCATCAACATATGCTTCCCCACCGCCACCTCCCCCTGTTCAATACAGTTCCCCACCACCTCCCTCAGTTCATTACAGTTCACCACCACCACCCCTATCACCTGTTTATTATAGTTCTCCACCACCACCATCATCACCCCCATGCGAAAATCCACCACCTCCTCCCTCGCCGCCTCCACCAGTTATATACGGAAGCCCACCACCTGCCCCTGTATATGAAGGACCTTTGCCGCCTATGTTTGGAGTCTCATACGCATCTCCTCCTCCACCACCCTTCTATTGA 2265 0.5311 MKNTVCFHFSLLLTSFFLATLSLSASQHVPITTHGALSHAEAIYIRQRQLLYYRDEFGDRGENVSVDPSLVFENDRIRNAYIALQAWKQAILSDPQNLTTNWVGPNVCDYTGVYCAPAPDNPKIRTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTIPHKFDRLKLLFELDISNNRFAGKFPEVVLRLPSLKFLDLRFNEFEGTVPKELFDKDLDAIFINDNRFVFDLPANFGNSPVSVIVVANNRFHGCIPASLGNMSNLNEIILMNNAFRSCLPSEIGLLKNLTVFDVSFNQLLGPLPDTIGGVVSLEQLNVAHNMLSGKIPASICMLPNLQNFTYSYNFFTGEPPACLALPSFDDRRNCLPSRPLQRSAAQCKSFLSKPVDCNSFKCKPFVPSPPSVVVPSPPPQISPPAPVVSPSPPVYIPQSPPPPPPSVYSPPPPSPPPPVYSPPPPVYSPPPPPPSPPPPVYSPPPPPPSPPPPLYSPPPPPPSPPPPVYSPPPPPPSPPPPVYSPPPPPPSPLPSPSPPPSSPAPTPPYCVRSPPPPHPNSPPPPAPIFSPPPPITYHYSSPPPSQHSPPPPHSPPPPIYPYISPPPPPLLIHSSPPPVHTPPPPSPLPCIEPPPPPSPPPCEEHSPPPPSPVPYRPPPSPSPPPPSTYASPPPPPPVQYSSPPPPSVHYSSPPPPLSPVYYSSPPPPSSPPCENPPPPPSPPPPVIYGSPPPAPVYEGPLPPMFGVSYASPPPPPFY 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1596 754 SUPERFAMILY L domain-like 81 364 - -
Glsi12g1596 754 Gene3D Ribonuclease Inhibitor 81 241 IPR032675 -
Glsi12g1596 754 PRINTS Proline rich extensin signature 403 415 - -
Glsi12g1596 754 PRINTS Proline rich extensin signature 438 454 - -
Glsi12g1596 754 PRINTS Proline rich extensin signature 417 438 - -
Glsi12g1596 754 PRINTS Proline rich extensin signature 457 474 - -
Glsi12g1596 754 Gene3D Ribonuclease Inhibitor 242 374 IPR032675 -
Glsi12g1596 754 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 13 552 - -
Glsi12g1596 754 MobiDBLite consensus disorder prediction 435 741 - -
Glsi12g1596 754 FunFam Leucine-rich repeat extensin-like protein 1 81 242 - -
Glsi12g1596 754 FunFam Leucine-rich repeat extensin-like protein 5 243 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1596 Glsi-ChrGlsi12 32794456 32796720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1596 1 398 Trihelix Transcription Factor Family AT4G18670 74.687 0.0 632