Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1579 ATGGCTGTGCTTCCACTTGAAAGGATACTTCAGTACTCTGGCATTCCAAGTGAGCCACCTCTTGTATTAGAAGAAAACCAACTAGCTCCTTCTTGGCCGTCACATGGAGAGGTAAATATTCATGATTTGCAGTTTGAGAATTCGTGTGAAGTTGGGGTGTTTTCAAAACTTACCAATGCCTATTGTTTGGTTGCTCTTGGAGGCTCTGAAAATTTCTACAGTGCATTTGAGGCTGAGTTAGCAGATGTTATACCTGTGGTGAAGGCATCCATTGCTGGTACACGTATTGTTGGTCGCCTTTGTATTGGAAACAAGAATGGGCTTCTATTGCCCCACAACACCACAGACCAAGGTGATTTAGAATATGAGATTATCGAATGTGATTATTAG 390 0.4205 MAVLPLERILQYSGIPSEPPLVLEENQLAPSWPSHGEVNIHDLQFENSCEVGVFSKLTNAYCLVALGGSENFYSAFEAELADVIPVVKASIAGTRIVGRLCIGNKNGLLLPHNTTDQGDLEYEIIECDY 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1579 129 Gene3D - 38 125 - -
Glsi12g1579 129 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 43 118 IPR002769 GO:0042256|GO:0043022
Glsi12g1579 129 SMART eIF6neu2 41 129 IPR002769 GO:0042256|GO:0043022
Glsi12g1579 129 Pfam eIF-6 family 43 117 IPR002769 GO:0042256|GO:0043022
Glsi12g1579 129 SUPERFAMILY Pentein 40 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1579 Glsi-ChrGlsi12 32677720 32679009 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1579 43 117 Eukaryotic Initiation Factors Gene Family AT3G55620 86.667 2.29e-44 143