Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1576 ATGTTTCTCTCGACGTTAGCGATCCCGGCGGTAATCATTTTGATACTCATATTCATTCTATCCACTGCCACATCGCGTCCGAAACGAAGCAAAGATGATCGGAAACTACCCCCAGGTCCACCAGCTTTGCCCGTTATCGGCAACCTCCACTTGTTGGGTGAACTCCCCCACCGCACCCTTCTATCATTGGCCACAAAATATGGCCCAATTATGTACTTGCGGCTGGGACAGGTACCAGCCATTGTGATTTCCTCCCCTGAAGCTGCCGAGTTATTCCTCAAGACCCACGACACTGTTTTCGCTAGCCGTCCCAAACTTCAATCTAGTGAGATCTTTTCCTATGGCTCCAAGGGCTTGGTGTTTTCCGAGTATGGTGCGTACTGGCGCAACATAAGGAAATTGTGTACCTTACATCTTCTCAGTGCATCAAAAGTTGAGTCCTTCGCTCCTTTGAGGAGGGAGGAGTTGGGACTGGTGGTGAAGTCACTTCAGAAAGCCGCAGCCGTGGGTGAGATTGTGGACCTTAGCCAGGTGGTACAGAATCTCATAGAGAATATGGTGTACAAGATGATATTGGGTTGTAACAAGGATGATCAATTTGATTTAAAGGGGCTCGTTCAAGAGGGAATGAGGCTCAGTGGAGCTTTTAATCTGGCAGATTATGTGCCTTGGCTTGGGGGATTTGATCTTCAGGGACTTAAACGAGCCATCAAGAAAACTAGTAGAGCGTTTGACGAGATACTGGAGAAGATGATTGGAGAGCATGAAGAGTCTTTTAATACACTAGGAGGCAGGCCCCATAAGGACTTCATAGACATATTGCTTTCATTGATGTACCAACCCTCTGATTCCTATGATGGACAGAACCATGGCATTGATCGAACAAACATTAAGGCTATTGCATTAGATATGATTGGTGGGGCATTAGAAACTTCTTCATCCGTAATTGTGTGGGCTTTATCTGAGCTCTTAAGGCATCCAAGGGTGATGAGAACCCTTCAAGATGAGCTAGAAACTGTGGTTGGATTAAACAGATTGGTGGAGGAGAGTGATTTAGCGAAGTTGAGTTACTTGGAAATGGTGATCAAGGAGACCATGAGATTATACCCTGCCGGATCATTAGTCCCTCGAGAGTCAACAGAGGATGCTGTGGTTGATGGTTACTTCATAAAGAAAAAAACACGAGTTATAATAAATTTATGGGCAATAGGACGAGATCCTAATGCATGGTCTGACCCTGAAGTATTCAATCCAGAGAGATTTATCAACAAAAATATGGACTTTCGCGGACTTGACTTTGAATTTATACCATTTGGATCTGGTCGCAGAGGATGTCCTGGGATACACTTAGGCCTAATTACAGTTAAACTTGTTCTGGCTCAATTGGTTCACAACTTTAGTTGGGGGCTTCCATGGGGTCTGACTCCTAATGACATGGACATGACCGAGAAATTTAGCCTCTCACTTCCAAGAGCCAAGAACTTGCATGCTGTTCCAACTTATCAAAATGTAGATGACGGCAAGAAAGAGCAGGAGACCCACAGTACAGATGATAAGGCAACGGAGGCGAAAACATGTGGCGTAGTAGAGAAGCAAGATGACGTAATTTTGATCTTTTTGAGGATGGGGAAGGAGGGAATAACGCGACGCTTAAAGAAAACAAGTAAAGTGCTAGATGACGCGCTGGAGAAGATAGTTCAGGAGCATGAGCAGGGTTCTAATGCAAAGAAAGAGCAGCGACATAAGGACTTTGTAGACACATTGCTGACATCTATGAACCAGCCCGTAAATTACCAGGATGAACATGTCATTGATCGAACTAACATCAAGGGTGTTATATTCGATATGCTTGCCGGCGGATTCGATACATCTGCTATTGTGATTGCCTGGGCATTTACAGAACTCATGAGGAATCCAAGGGTCATGACAAAGCTCCAAAATGAGCTACAACATGTTGTGGGAATGACCAGAATGGTCGAAGAATCCGATTTACCACACCTCACCTACCTAGATTCGGTAGTGAAGGAAACCCTCAGGCTATATCCTGTTGGACCTTTACTAGTTCCTCGCGAGTCTCTAGAGGATATTACCATAGATGGTTATTTCATCAAGAAAAAATCACGAATCCTTGTCAATGCGTGGGCTATAGGTCGAGATACCAATGTGTGGTCACATAATGCTGAAACCTTTTACCCAGAAAGGTTTACCAACAGCAACATCGACCTTAAGGGACATGACTATCAACTCATACCCTTTGGAGCTGGTCGCCGAGGATGTCCTGGGTTACAGTTAGGCCTGGTTACAGTCAAACTTGTTCTGGCTCAATTAGTGCATTGCTTTAATTGGGAGCTTCCGAGTGGCACCGTTATTGGAGACTTGGACATGACAGAGAAATTTGGGTTAACAATGCCAAGAGTGCAACACTTGTTGGTTGTTCCAACTTGTCGCATTATTCCTGAAGCTTATAATGTATTAAATCAAGGATCGTAA 2490 0.445 MFLSTLAIPAVIILILIFILSTATSRPKRSKDDRKLPPGPPALPVIGNLHLLGELPHRTLLSLATKYGPIMYLRLGQVPAIVISSPEAAELFLKTHDTVFASRPKLQSSEIFSYGSKGLVFSEYGAYWRNIRKLCTLHLLSASKVESFAPLRREELGLVVKSLQKAAAVGEIVDLSQVVQNLIENMVYKMILGCNKDDQFDLKGLVQEGMRLSGAFNLADYVPWLGGFDLQGLKRAIKKTSRAFDEILEKMIGEHEESFNTLGGRPHKDFIDILLSLMYQPSDSYDGQNHGIDRTNIKAIALDMIGGALETSSSVIVWALSELLRHPRVMRTLQDELETVVGLNRLVEESDLAKLSYLEMVIKETMRLYPAGSLVPRESTEDAVVDGYFIKKKTRVIINLWAIGRDPNAWSDPEVFNPERFINKNMDFRGLDFEFIPFGSGRRGCPGIHLGLITVKLVLAQLVHNFSWGLPWGLTPNDMDMTEKFSLSLPRAKNLHAVPTYQNVDDGKKEQETHSTDDKATEAKTCGVVEKQDDVILIFLRMGKEGITRRLKKTSKVLDDALEKIVQEHEQGSNAKKEQRHKDFVDTLLTSMNQPVNYQDEHVIDRTNIKGVIFDMLAGGFDTSAIVIAWAFTELMRNPRVMTKLQNELQHVVGMTRMVEESDLPHLTYLDSVVKETLRLYPVGPLLVPRESLEDITIDGYFIKKKSRILVNAWAIGRDTNVWSHNAETFYPERFTNSNIDLKGHDYQLIPFGAGRRGCPGLQLGLVTVKLVLAQLVHCFNWELPSGTVIGDLDMTEKFGLTMPRVQHLLVVPTCRIIPEAYNVLNQGS 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1576 829 PANTHER CYTOCHROME P450 93A3-LIKE 12 503 - -
Glsi12g1576 829 Pfam Cytochrome P450 539 808 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1576 829 Pfam Cytochrome P450 37 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1576 829 FunFam Cytochrome P450 83B1 23 498 - -
Glsi12g1576 829 Coils Coil 230 250 - -
Glsi12g1576 829 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Glsi12g1576 829 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 752 761 IPR017972 GO:0005506|GO:0016705
Glsi12g1576 829 SUPERFAMILY Cytochrome P450 33 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1576 829 PRINTS P450 superfamily signature 750 759 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1576 829 PRINTS P450 superfamily signature 619 636 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1576 829 PRINTS P450 superfamily signature 672 683 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1576 829 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1576 829 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1576 829 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1576 829 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1576 829 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1576 829 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1576 829 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1576 829 SUPERFAMILY Cytochrome P450 539 816 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1576 829 FunFam Uncharacterized protein 502 812 - -
Glsi12g1576 829 Gene3D Cytochrome P450 515 813 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1576 829 Gene3D Cytochrome P450 22 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1576 829 CDD CYP71-like 66 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1576 Glsi-ChrGlsi12 32601662 32609576 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1576 545 824 Cytochrome P450 AT5G07990 41.549 1.19e-63 221