Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1575 ATGTTGCCTTCAACCTTACCCATTCCTGCACTCCTCCTCCTCGCTTTTTTATTCATCCTATCAGCTGCGCTGTTCCGTTTTAACCAAAGCAAGCATGATCGGAAACAACCACCAGGTCCGGCGACCTGGCCGCTTATTGGCAACCTCCACATCTTGGGTGCTCTCCCGCACCGCACCCTTCAATCCCTCGCAAACCGATACGGCCCCATCATGTCCTTGCAACTAGGACAGGTCCCAACTATTGTGATCTCTTCCCCTGAAGCCGCTGAGCTTGTCCTCAAGACCCACGATACCGTTTTCGCCAGCCGCCCTAAAACCCAAGCATCTGACTACATGTCCTATGGTTCCAAGGGCTTGGCGTTTTCCGCGTATGGTCCCTACTGGCGCCACATTAGGAAACTCTGTACTTTACAGCTTCTTAGCGGGACCAAAGTTGAGCTGTTTGGTCCACTGAGAAGGCAGGAACTGGGGGAGATGGTGAAGTCACTTGAGAAAGCGGCGGCTTCGCGTGAGGTTGTGGATCTGAGCGACAAGGTGGGGAATCTTGTGGAGGATATAACGTATGGGATGATATTGGGGCGTAAGAGGGACGATAGATTTGATGTGAAGGGACTTGTTCACGAGGCACTGAACTTGACCGGAGCTTTTAATGTTGCAGATTTTGTGCCTTTTCTCGGGGCATTTGATTTTCAGGGCTTCACACGACGCTTAAAGAAAATTAGGAAGGAACTTGATAAGATGTTGGAAAAGATCGTTCAGGAGCATGAAGACGCTTCTGATTTGCAGAAAAGTCAACAGAAGGACTTCGTGGACATATTGCTCTCTTGCATGAACACACCCATGGATGATCAAAACCTTGTAATTGATCGAACCAACATCAAGGCCATCATTTTCGATATGCTTGTTGCTGCAGTGGACACTTCTGCTACTGCCATTGAGTGGGCTTTCTCAGAACTCTTGAGGCATCCAGAAGTGATGAAAAAACTCCAACATGAATTAGAAAATGTAATAGGAATGAACAGAAAGGTAGAGGAGGCTGATTTACCAAGGTTGAGCTATTTAGATATGGTGGTGAAGGAGACCTTAAGGCTACATCCTGTTGGCCCATTACTAGTGCCCCGAGAGTCTGCTCAAGATGTTATGCTTGATGGTTACCTCATCAGGAAAAAATCACGAATTATAGTGAATGCGTGGGCTATAGGGCGAGATCCGAGGATATGGTCAGATAATGTGCAAGTGTTCTATCCAGAGAGGTTCATCAATAGCAATATAGACCTTAGAGGACATGACTTTCGACTCATACCGTTTGGTTCAGGTAGAAGAGCGTGCCCTGGTATACAATTGGGTCTAACTACTGTTAGACTAATTCTTGCACAATTGGTGCATTGCTTTAATTGGGAGCTTCCTCATGGCATCACTCCTGATGAGTTGGATATGACTGAGAAATTTGGCCTGTCAATGCCAAGAGCTAACCACTTGCTAGCTCTGCCAACTTCTCGCCTTGCTATTTGA 1512 0.4702 MLPSTLPIPALLLLAFLFILSAALFRFNQSKHDRKQPPGPATWPLIGNLHILGALPHRTLQSLANRYGPIMSLQLGQVPTIVISSPEAAELVLKTHDTVFASRPKTQASDYMSYGSKGLAFSAYGPYWRHIRKLCTLQLLSGTKVELFGPLRRQELGEMVKSLEKAAASREVVDLSDKVGNLVEDITYGMILGRKRDDRFDVKGLVHEALNLTGAFNVADFVPFLGAFDFQGFTRRLKKIRKELDKMLEKIVQEHEDASDLQKSQQKDFVDILLSCMNTPMDDQNLVIDRTNIKAIIFDMLVAAVDTSATAIEWAFSELLRHPEVMKKLQHELENVIGMNRKVEEADLPRLSYLDMVVKETLRLHPVGPLLVPRESAQDVMLDGYLIRKKSRIIVNAWAIGRDPRIWSDNVQVFYPERFINSNIDLRGHDFRLIPFGSGRRACPGIQLGLTTVRLILAQLVHCFNWELPHGITPDELDMTEKFGLSMPRANHLLALPTSRLAI 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1575 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Glsi12g1575 503 Coils Coil 326 346 - -
Glsi12g1575 503 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1575 503 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1575 503 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1575 503 FunFam Cytochrome P450 83B1 24 496 - -
Glsi12g1575 503 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1575 503 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1575 503 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1575 503 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1575 503 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1575 503 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1575 503 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1575 503 CDD CYP71-like 66 493 - -
Glsi12g1575 503 Coils Coil 230 261 - -
Glsi12g1575 503 PANTHER CYTOCHROME P450 93A3-LIKE 13 501 - -
Glsi12g1575 503 SUPERFAMILY Cytochrome P450 37 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1575 503 Gene3D Cytochrome P450 25 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1575 503 Pfam Cytochrome P450 37 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1575 Glsi-ChrGlsi12 32586728 32588407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1575 37 499 Cytochrome P450 AT3G48310 42.241 1.65e-131 389