Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1567 ATGCAACCCCTACCCATGAGCCATTATTCTCCCGTGTACTTCAGCTGGGCACGTAGAAACTCGATGCTGAAGAGGGAAGAGAAGGTACCACTGCACCAGAACAAAGAATATCTCAGGGTTAGAACATATGTAACTGGAATTCGGAAGAAAATAGGAGAGGTCATCGAGTACCCTTCTCAAAAACTTGGAGTGGAGTTGAATAAATCAACATATATGCAATGTTCCAACATTGCAAGCCATCAGCACCGCATTTCATACATGGCCTCTACAGGAAGAAGCAATATTACCTACGACACAATCATGCGGCTAAGCTGTAATGGTTGCCGAGTCCTCCGCAAAGGTTGCGCCGCCGATTGCCCCATTAGACCCTGTCTTCACTGGATCAAATCGCCTGAATCCCAAGCCAATGCCACCCTCTTCCTCGCCAAGTTCTACGGCCGTGCTGGCCTCATCAACCTCATCAATGCTGGATCCCCACAACTCCGACCAGCGATTTTTAAGTCCTTGCTATACGAAGCTTGTGGGCGGATTGTGAACCCGATTTTCGGGTCTGCCGGGTTACTCTCTTCCGGGAGCTGGCACCTCTGTCAAAACGCCGTCGAAGCCGTTCTCATGGGTGCGCCGATTACGCAGGTTTCACCCGAGTCGGCTTTCGATGGCGTGAGTCCACTGCTCAAATCCTGCGATATACGGCACGTGGGCAGAAAGGGAAATTCGCGTGCGTCTGATCAGCTACATAAGGTCAGGAGAGGGAACCAGTTCAAAAGCTCGGCCGCAAAGCAGAAGACCCAAGTAGAGTCAGCAGTAGGCGAGTTGATGGCTCAATCGGGGAGCGAGTTGGATGGTTCTGGGGTGAGCGAGCATAAAAGTGGAGGTGGAAGTGTTAGTGGTGAAGCTGAAAGCAGCACGGTCGAGACCGGGGAAGCATGGACGCCGGCGAGGAGCAATGAGGGAAGCGAAGCCGAGGATGGGGAGTTAGAGCTAGAGTTAACTATGTGGTGGGGTGCAGCAAAGGGGAGTGAAGATATCAACGGCTCTGATGCTGACACTCGTAAGTTACAACAACATGGTATTGATCTTTCTGGTTAG 1089 0.5152 MQPLPMSHYSPVYFSWARRNSMLKREEKVPLHQNKEYLRVRTYVTGIRKKIGEVIEYPSQKLGVELNKSTYMQCSNIASHQHRISYMASTGRSNITYDTIMRLSCNGCRVLRKGCAADCPIRPCLHWIKSPESQANATLFLAKFYGRAGLINLINAGSPQLRPAIFKSLLYEACGRIVNPIFGSAGLLSSGSWHLCQNAVEAVLMGAPITQVSPESAFDGVSPLLKSCDIRHVGRKGNSRASDQLHKVRRGNQFKSSAAKQKTQVESAVGELMAQSGSELDGSGVSEHKSGGGSVSGEAESSTVETGEAWTPARSNEGSEAEDGELELELTMWWGAAKGSEDINGSDADTRKLQQHGIDLSG 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1567 362 MobiDBLite consensus disorder prediction 295 313 - -
Glsi12g1567 362 MobiDBLite consensus disorder prediction 275 362 - -
Glsi12g1567 362 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 103 330 - -
Glsi12g1567 362 MobiDBLite consensus disorder prediction 235 262 - -
Glsi12g1567 362 MobiDBLite consensus disorder prediction 235 250 - -
Glsi12g1567 362 Pfam Lateral organ boundaries (LOB) domain 104 203 IPR004883 -
Glsi12g1567 362 ProSiteProfiles LOB domain profile. 103 209 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1567 Glsi-ChrGlsi12 32529310 32533077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1567 101 332 AS2 family AT3G02550 52.521 1.38e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi12g1567 LOB 6.8e-22 No_clan