Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1544 ATGCCTATGCCGGCCTTGAGCGCGTGCCATGTGGTTTTGTCTGGGAGTATGAAGCTTAAAGTTAAAAGGCATAAAAGCAAACCCCCTCATTTCGCTGCAACCTTACACCAAACCCATCCCCTTTCACTCTCTCTGCTGATCAAGTATTCCCAAAAAATGGCGGCCAAACGCTTCTTTGATGATTCTGATCAAGACTCAGATAAGCCTTGCGACAAACGGATCAGAACTTCTCGACCTTCTTTTGCTTCGGTAATAGGAGAAGTGGTTATGGTGAAAAACATGCAGAACCTTTTCTCAACCTTGGAGCCTTTGCTTAGAAAAGTGGTGACTGAAGAGGTGGAGCGAGTTATGAGGCATTGTTGTCCTCGCTCTATAACCAGGTCTCCTTCCTTGAGAATCCAGGCTCCATCGGAGCACCAATCGAGCCTTCAACTAATCTTCAACAAAAGGCTTTCCCTCCCAATATTCACTGGAAGCAGGATTCTGGACAGTGACGGGAACCCCATCCAAGTCCTTCTTGTTGAGAAGAACGGCAATCAAATGGTTCCCACCAGTCTCTCATATCCCATCAAGCTCGAAATTGTGGTTCTGGATGGAGATTTTCCAGCAGATGATAACGAGACATGGACAAGCGAGGAGTTTAATAGGCACATGTTAAAGGAGAGAACCGGGAAGCGACCATTGCTTGCTGGAGATTTGAACCTCACCATGAGGGATGGGATTGCACCAACTGGGGACATTGAGTTTACCGACAACTCTAGCTGGATTCGGGGCAGGAAGTTCAGAGTGGCCGTCAGGGTGGCTCCGGGGATTAATCAAACTGTTCGGATTCGCGAAGGCATGACTGAAGCATTTGTCGTTAAGGATCATCGCGGAGAACTGTACAAAAAACACTATCCGCCGATGTTGGGCGATGAAGTGTGGCGGCTAGAGAAGATTGGGAAAGATGGAGCTTTCCACAGGAAGTTGTCCGCGGCGGGGATTCGCACAGTGCAAGAGTTTCTCAAGTTGTCGATTGTTGATCCTCAGAAGCTCAAAAAGATTTTAGGGGTTGGGATGTCGGACAAGATGTGGGAAGTGACAATCAAACATGCAAGATCTTGTGAGATGGGGAACAAGCTTTACGTGTACCGTGGTCCTAATCTTGCCTTTTACTTGAATCCAATTTGCCAAATAATTAAAGCTGAAATGAATGGCCACATTTATTCGGGCAGAGAACTCACCAATAATATCAGTAGGAACTATGTAGAGAATGTGGTCAGAGACGCTTATGAGAGATGGAATTGCTTGGAGGAAATTGACGAACTCTTGAATGATAATGTTGCCTTATTAACCCAAGGTGAAAGTGTGGAGCAATTTGGGAACAACAACCATCAAACATCGGTGATAACATATGACGAGAACGATTTCTTCAGTGACAAAAACAGAGAGGTTGGGAGCTATGGATCAAGTAGCAATGCACAAATTGGTGGATGCACTGAGTGGAATCCAACATCCTTCGCAAATGGCATTGCTTTTAACTTCTCAGACTCTCAGTCGGAGGGGAATATAACGCCCTCCGTCTCTGTCTCTGCCTCTGCCTCTTTTATTGATGGGCCTCCAACTGCAAGATGGCCTTAG 1620 0.4623 MPMPALSACHVVLSGSMKLKVKRHKSKPPHFAATLHQTHPLSLSLLIKYSQKMAAKRFFDDSDQDSDKPCDKRIRTSRPSFASVIGEVVMVKNMQNLFSTLEPLLRKVVTEEVERVMRHCCPRSITRSPSLRIQAPSEHQSSLQLIFNKRLSLPIFTGSRILDSDGNPIQVLLVEKNGNQMVPTSLSYPIKLEIVVLDGDFPADDNETWTSEEFNRHMLKERTGKRPLLAGDLNLTMRDGIAPTGDIEFTDNSSWIRGRKFRVAVRVAPGINQTVRIREGMTEAFVVKDHRGELYKKHYPPMLGDEVWRLEKIGKDGAFHRKLSAAGIRTVQEFLKLSIVDPQKLKKILGVGMSDKMWEVTIKHARSCEMGNKLYVYRGPNLAFYLNPICQIIKAEMNGHIYSGRELTNNISRNYVENVVRDAYERWNCLEEIDELLNDNVALLTQGESVEQFGNNNHQTSVITYDENDFFSDKNREVGSYGSSSNAQIGGCTEWNPTSFANGIAFNFSDSQSEGNITPSVSVSASASFIDGPPTARWP 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1544 539 Pfam Calmodulin binding protein C-terminal domain 373 433 IPR046829 -
Glsi12g1544 539 Pfam Calmodulin binding protein-like N-terminal domain 143 290 IPR046831 -
Glsi12g1544 539 Pfam Calmodulin binding protein central domain 302 368 IPR046830 -
Glsi12g1544 539 PANTHER OS02G0177800 PROTEIN 53 504 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1544 Glsi-ChrGlsi12 32380284 32385059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1544 55 434 Calmodulin-binding Proteins AT5G57580 47.927 2.89e-117 358