Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1526 ATGGATCCAGCATCGCCGGCACCAACATCTGTGGCACCCCTCTCCGCCACCACTAACGCCACCACCATCCAACTAAACTACCCTGACTCAGTGGACTCCTCTCCCCGCTCCCGCATTGTTGAAAACTGGGCTGATGAGCCCCTCCCCCCTGTCCCTGGTGCCAAGCTCCGCCTGATGTGCAGCTATGGCGGGCACATCATGCCGCGCCCACATGACAAGACCCTTTGCTATGTCGGCGGCGACACCCGCATCATAGTTGTTGATCGGCATTCCACCCTCAAGGATTTCTGTGGCCGTCTCTCTCGTACCTTGCTCAATGGCCGAATCTTCACCCTCAAGTACCAGCTACCCAACGAAGATCTTGACAATCTCGTATCAGTCACCACTGATGAAGACCTGGAGAACATGATCGAAGAACATGACCGCATAACAGGTGCTTCCCCTCCTAAGCCTTCACGTTTAAGGCTTTTTCTCTTTTTCCCTAAGCCAGAGTCTACTGTTTCAATGGGTTCACTCCTCGACGACGCCAAGTCAGAGACATGGTTCGTGGACGCTCTTAACAACTCAGGGATCATCAAACGCGGAGTTTCGGATTCTGCCACCGTGGATGGCTTGGTGAACCTTGATGGGGTTCCTGCTAGTGATTCGAGCAATAATTTGGAGGCTCAGGCTGATAACAATAAACAGGTCAAGAATTTGCCTGATGTGCATTCGATGCCCGGCTCGCCTATGGTGGAGAACAGTTCATCATATGGGTCTTCTTCTTCCTCGCCGTCAATGGCTAATCTGCCTCCTATTCGGGTTCGTGTTGATGACAATGGTAGCAGGCTGCAGCAAGAGCAGAGGTCAGGGATTGAGGAGCAGTTCGCGCAAATGACCTTTGCAACTAGTGCGATGAAGCAAGATGAAGGGTATGCTATGTTGACTGCTCCTATGCCTTCAATTCCAGCGGCTGTGACTATGGCATCAGTAGCGATGGTTACCGGTGATCATATGAATCGAGTGATCTCTGATGACGAGAAATCAGATCAGGGAGCACCTGCTGGGCTTCGGAAGCCCCCCTTACCTTTACAGCTTGTGCAACCAAGGACTAGTGGTGGTTTAAGTCTGCCTTCTCCAGATTCAGTTGCAAGTGACAGCAGTATTGCATCTGCAAACTCTTTCTCAAAGTCTGTTTACTATCAAGACCAAGTCCAAGCTGCATATTTAGACCACAAAGCCCCTGCTTTGTCACATACTAAGAGTGACATATCTGATCCTAATCCTGGATTCCAAAGAGACCTAGCTCAGGATTGTACTTACACATTACCCCCACAGTTGGATCAAAATCTGCAAATCCAGCAGCAACAGCAATTTGTTCATGCCAGCACCCACTACATCCACCAACCTGCACCCACAGGTGCAGTGCCAATGTCATCCTACTACCCAGTTTATGCCCCACCATCACAGCAGCAAATTCATCATCCAATTGGTCAGCAGTACCCAGTTTATGTAATGCCTGTTGGACATACACAAGCTTACAATATGACTATGCAACCCAATATGGCTGACCCCAATGTGGTGGCCTCAGTCAGGCCACTAATACCCCAGAGTGCTGCTGCTCCAGCTTCTTACAAGGATGGCACTCCACCCATATACCCGACTAAGTCAGCTACCCCTACTATACCTGATGTGGCTCCAAGTGTGTACAAAGCTCCTGTGCCATCAAATCCGGCATTTGTTCAAATACCTTCCAGTCAATTCCAGCAACAGTATGTGGGTATGCCCCAAATCCATCAACAACCACAGTCCATTGCTGTTGCTTCCTCTGCTACTACAAATTATGGCTATGATTATGGTGTACCTGCACAAGACCAAGCATACTACACACAACAGCAAACTACTCCATTGCCCCTTCAATACCAATCCATGACCCCGGCAGCAGCGGTAGCAGCACTATCAGATGCTTCAAAACAATTTCCTGCAGAAAACATTCAGCAGCCAAACAGAACTTCACAGCCAGTGTGA 2007 0.4958 MDPASPAPTSVAPLSATTNATTIQLNYPDSVDSSPRSRIVENWADEPLPPVPGAKLRLMCSYGGHIMPRPHDKTLCYVGGDTRIIVVDRHSTLKDFCGRLSRTLLNGRIFTLKYQLPNEDLDNLVSVTTDEDLENMIEEHDRITGASPPKPSRLRLFLFFPKPESTVSMGSLLDDAKSETWFVDALNNSGIIKRGVSDSATVDGLVNLDGVPASDSSNNLEAQADNNKQVKNLPDVHSMPGSPMVENSSSYGSSSSSPSMANLPPIRVRVDDNGSRLQQEQRSGIEEQFAQMTFATSAMKQDEGYAMLTAPMPSIPAAVTMASVAMVTGDHMNRVISDDEKSDQGAPAGLRKPPLPLQLVQPRTSGGLSLPSPDSVASDSSIASANSFSKSVYYQDQVQAAYLDHKAPALSHTKSDISDPNPGFQRDLAQDCTYTLPPQLDQNLQIQQQQQFVHASTHYIHQPAPTGAVPMSSYYPVYAPPSQQQIHHPIGQQYPVYVMPVGHTQAYNMTMQPNMADPNVVASVRPLIPQSAAAPASYKDGTPPIYPTKSATPTIPDVAPSVYKAPVPSNPAFVQIPSSQFQQQYVGMPQIHQQPQSIAVASSATTNYGYDYGVPAQDQAYYTQQQTTPLPLQYQSMTPAAAVAALSDASKQFPAENIQQPNRTSQPV 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1526 668 PANTHER OS05G0427100 PROTEIN-RELATED 26 507 - -
Glsi12g1526 668 MobiDBLite consensus disorder prediction 214 267 - -
Glsi12g1526 668 MobiDBLite consensus disorder prediction 214 233 - -
Glsi12g1526 668 CDD PB1_UP2 59 159 - -
Glsi12g1526 668 MobiDBLite consensus disorder prediction 242 262 - -
Glsi12g1526 668 Gene3D - 73 160 - -
Glsi12g1526 668 SMART PB1_new 70 159 IPR000270 GO:0005515
Glsi12g1526 668 MobiDBLite consensus disorder prediction 362 380 - -
Glsi12g1526 668 SUPERFAMILY CAD & PB1 domains 71 170 - -
Glsi12g1526 668 MobiDBLite consensus disorder prediction 337 380 - -
Glsi12g1526 668 Pfam PB1 domain 72 159 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1526 Glsi-ChrGlsi12 32270992 32273173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1526 54 241 MAP Kinase Kinase Kinase AT1G79570 35.638 2.73e-25 110