Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1515 ATGTATGGCTTGCTTATCACCGTAAAATGTTTTGGCAGCTTATTCAACAATATATGTTGTTGTTTTGTTTATTGCAACAAGGAGATCACAAGAATGGGAAGTGCTGTGACAGAGAAAGCGAAGCTGCTTTTGGCATTACTTGCTCTCCAGTTCTGCTTTGCAGGATTTCACGTTGTTTCTAGACTTGCACTAAACATTGGTATCAGCAAAGTTGTTTACCCTGTTTACAGAAATATAATTGCTCTGCTTTTGCTGAGCCCTCTTGCTTATTTCTTAGAGAAGAATCAAAGACCACCTCTTACTTTTTCTTTACTGGTTCAGTTCTTCCTTTTAGCATTACTGGGCATTACTGCAAACCAAGGGTTTTACTTGTTAGGATTATATTATGCATCTCCAACATTTGCTTCTGCAATGCAAAACTCAGTGCCTGCCATCACTTTTGTCATGGCCTTAGCTCTCAGGCTTGAGGAACTCAACATTGCAAGAAGAGATGGAATGGCAAAAGTTCTAGGAACCATTGCCAGTGTTGGGGGTGCCACTGTGATTACTCTCTACAAAGGCCCTCCTCTTCTCCACCAGACCAACCAAATACAAGGAGACACCTTAGAAGCAGATCAATTTTCCATAAAACCAGAAAACTGGACATGGGGTTGCATATACTTGCTTGGACATTGTTTATCATGGGCTGGCTGGATGGTTTTTCAGGCTCCTGTGGTGAAAAAGTATCCGGCAAAGCTGACACTCACATCATTTACATGCTTCTTTGGATTGATCCAATTCTTGATCATAGCAGCTTTTGTAGAAACTGACTTGGAGCATTGGAAGATACAGTCCGCAGAGGAGCTTTTCACTATCCTATATGCTGGAGTGGTAGCATCCGGCATTGTCATATCTCTCCAAACATGGTGCATTCAAAAAGGTGGCCCTGTGTTTGTTGCTGTCTTCCAGCCCATGCAAATGTTTTTAGTTGCTATCATGGCAGCCCTAATACTTGGTGATCAGTTATACTCTGGAGGGATTATTGGTGCAATTCTTATTGTACTTGGTCTCTACTTAGTCCTATGGGGCAAAACCACTGAAAAAAGAGTGGCTATTCCCGAGGAGTCATCATTATCAAAGCCACTTCTTAATGCTGAAGAGAATAAAGAAGCTGATGCAGATGCCCAAGACATACCCTGA 1179 0.419 MYGLLITVKCFGSLFNNICCCFVYCNKEITRMGSAVTEKAKLLLALLALQFCFAGFHVVSRLALNIGISKVVYPVYRNIIALLLLSPLAYFLEKNQRPPLTFSLLVQFFLLALLGITANQGFYLLGLYYASPTFASAMQNSVPAITFVMALALRLEELNIARRDGMAKVLGTIASVGGATVITLYKGPPLLHQTNQIQGDTLEADQFSIKPENWTWGCIYLLGHCLSWAGWMVFQAPVVKKYPAKLTLTSFTCFFGLIQFLIIAAFVETDLEHWKIQSAEELFTILYAGVVASGIVISLQTWCIQKGGPVFVAVFQPMQMFLVAIMAALILGDQLYSGGIIGAILIVLGLYLVLWGKTTEKRVAIPEESSLSKPLLNAEENKEADADAQDIP 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1515 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 76 172 - -
Glsi12g1515 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 273 358 - -
Glsi12g1515 392 PANTHER WAT1-RELATED PROTEIN 43 368 IPR030184 GO:0016020|GO:0022857
Glsi12g1515 392 Pfam EamA-like transporter family 216 354 IPR000620 GO:0016020
Glsi12g1515 392 Pfam EamA-like transporter family 43 183 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1515 Glsi-ChrGlsi12 32150335 32153943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1515 26 389 Nodulin-like Gene Family AT3G18200 66.667 7.01e-178 498