Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1505 ATGGGAGAGGCGAAGCTGATTGCAACTCCACAAAGCTTTCCCTGTGCCAGAATAGAATGGGCTTTGAGGATAAAGGGTGTGGAATACGAGTACGCGAAAGAAGATCTGGCCAACAAAAGTCAACTGCTTATTGAGTCCAACCCTGTGTACAAGAAGGTCCCAGTGTTTCTGCACGATGGCAAATCAATTGCTGAATCCCTTGTCATCCTTGAATACATAGATGAGACATGGAAGCAAAACCCTTTGCTACCACAAGACCCATACGAGAGAGCCCTCGCTCGTTTCTATTCAAAATTTATTGATGAAAAGATTGTGCTTGGTGTATGGGGAGCCGGTGTAACCCAAGGTGAAGAAAAAGGCAAAGCCATAGAGTCTGCGAAGGAGTTACTGGCAATTCTTGAGAAGCAGATCGAAGGGAAGAAGTTTTTTGGAGGTGATAAGATAGGGTATTTGGATATTGTAGCTGGTTGGATACCTCATTGGCTTAATGTGCTGGAAGAACTTGGGGAAATGGATTTGCAGATTGCTGAGAGGTTCCCATCACTGCATGAATGGGGAAAGAACTTGATGCAGACTTCACCAGTCAAAGATTGCATTCCACCCAGAGAAACGGTTGTTGATTACTTCAGTTTCGGCTTCAGCTATGTGCGTTCTATTGCAGCCAATAAATCATGA 675 0.4444 MGEAKLIATPQSFPCARIEWALRIKGVEYEYAKEDLANKSQLLIESNPVYKKVPVFLHDGKSIAESLVILEYIDETWKQNPLLPQDPYERALARFYSKFIDEKIVLGVWGAGVTQGEEKGKAIESAKELLAILEKQIEGKKFFGGDKIGYLDIVAGWIPHWLNVLEELGEMDLQIAERFPSLHEWGKNLMQTSPVKDCIPPRETVVDYFSFGFSYVRSIAANKS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1505 224 SUPERFAMILY Thioredoxin-like 5 104 IPR036249 -
Glsi12g1505 224 Gene3D Glutaredoxin 1 82 - -
Glsi12g1505 224 Pfam Glutathione S-transferase, N-terminal domain 16 75 IPR004045 -
Glsi12g1505 224 SFLD Main.3: Omega- and Tau-like 2 211 IPR045073 -
Glsi12g1505 224 CDD GST_N_Tau 15 77 - -
Glsi12g1505 224 SFLD Main (cytGST) 2 211 - -
Glsi12g1505 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Glsi12g1505 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 208 IPR010987 -
Glsi12g1505 224 CDD GST_C_Tau 87 211 IPR045074 GO:0004364|GO:0006749
Glsi12g1505 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 206 IPR045073 -
Glsi12g1505 224 SUPERFAMILY GST C-terminal domain-like 75 211 IPR036282 -
Glsi12g1505 224 FunFam Tau class glutathione S-transferase 83 218 - -
Glsi12g1505 224 Pfam Glutathione S-transferase, C-terminal domain 117 191 IPR004046 -
Glsi12g1505 224 Gene3D - 83 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1505 Glsi-ChrGlsi12 32090660 32091571 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1505 3 209 Glutathione S-transferase Gene Family AT2G29420 47.343 1.94e-68 208