Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1488 ATGGGTGGAGGAGGAACACTGGTGGACGGGATTCGTCGCTTGTTTCAACGTCGCTCTTCTGCTGCTATTAAGTCTTCTGATGACGAGCATATTCGCCATAATAGCTATAACAATGGCGAACGTAGTGCTAACAACAACAATAGCCTCTCGTTCGTGAGAGATTTGCGCGCACAATTGGCCTCTATTCCCAATCGGGAAAGAGAGGAAGGTGAGGGAGCTGAAGAGAGGCTCAAGATCGAGGAAGATTTTGATATCTCTGGCTTGAATCCTATCAAAGTACCTGCCCGAACCCCCTTCAAAGCTGCTTTTATGGATCCTCAGAAAAAGGGCATGGTAGAAACAGAATTCTTCACCGAGTATGGAGAGGCAAGTCAATATCAGGTTCAAGAAGTTGTTGGAAAAGGGAGTTATGGTGTTGTTGGTTCTGCCATTGATACTCATACCGGAGAAAAAGTTGCAATTAAGAAAATTAATGATGTTTTTGAGCATGTCTCAGATGCCACACGGATCCTAAGAGAAATTAAACTCCTTCGGTTGCTCCGACATCCTGATATAGTAGAAATTAAGCATATAATGCTTCCTCCTTCACGGCGAGAGTTCAGGGATATCTATGTTGTATTTGAGTTGATGGAATCTGACCTCCATCAAGTAATTAAGGCAAATGATGATCTTACTCCTGAGCACTACCAATTTTTCTTGTACCAACTTCTTCGGAGCCTGAAATATATACATTCAGCAAATGTGTTTCATCGCGATTTAAAGCCCAAAAATATTCTTGCTAACGCTGATTGCAAACTGAAGATATGTGATTTTGGCCTTGCTCGAGTTTCTTTTACTGACACTCCTTCGGCTATATTCTGGACTGATTATGTTGCAACTCGGTGGTATCGTGCACCTGAACTGTGCGGTTCCTTTTTCTCAAAATATACCCCCGCAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTTTCTGGGAAGCCATTGTTTCCTGGTAAAAATGTGGTGCACCAATTGGATATCATGACTGATTTGCTTGGTACTCCTCCTACTGAATCCATTTCAAGGATTCGAAATGAGAAGGCTAGAAGGTACCTTAGTAGCATGCGGAAAAAGCAACCAGTTCCATTCTCCCAAAAGTTCCCTAATGTAGATCCATTGGCTCTTCGTTTGCTGGAGCGCCTGCTTGCATTTGATCCTAAAGATCGTCCAACAGCTGAAGAGGCATTGGCTGATCCTTACTTCCATGGTTTGGCAAATGTGGATCGTGAACCATCCACTCAACCCATTTCAAAACTTGAGTTTGAGTTTGAGAGAAGAAAATTGACCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTCTAGAATATCATCCTCAGATGCTCCAGGAATGTCTGCGTGGTGGAGATCAGACCAGCTTTATGTATCCAAGTGGGGTTGATCGGTTCAAGAGACAGTTTGCACATCTTGAGGAACATTATGGCAAAGGTGAACGAAGCACTCCATTGCAGAGACAGCATGCCTCCTTACCTAGGGAACGAGTTATTGTTCCCAAGGATGAAGATAGTCAGAACAATGATTTTGAAAGGCGAACTGCTGCTGCTGTTGGAACAACTCTTCAGAGTCCCCCAACAGATGCTGGAAACTCAGATGCAGAAAATGGAACCTTCAAGCCCAACCCCAGTGCACGCAGCCTGTTGAAGAGTGCCAGCATTAGTGGTTCAAAGTGTATTGGTGTAAAACCAACTAAAGATCCAGAGGAGGAGCCTATTGCTGAGGTCAATGATGAGGAGGCAGTAGATGTGCTGATAGAGAAGGCGGCTGCCCTCCATACTTAG 1848 0.4372 MGGGGTLVDGIRRLFQRRSSAAIKSSDDEHIRHNSYNNGERSANNNNSLSFVRDLRAQLASIPNREREEGEGAEERLKIEEDFDISGLNPIKVPARTPFKAAFMDPQKKGMVETEFFTEYGEASQYQVQEVVGKGSYGVVGSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRSLKYIHSANVFHRDLKPKNILANADCKLKICDFGLARVSFTDTPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLSGKPLFPGKNVVHQLDIMTDLLGTPPTESISRIRNEKARRYLSSMRKKQPVPFSQKFPNVDPLALRLLERLLAFDPKDRPTAEEALADPYFHGLANVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQECLRGGDQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLQRQHASLPRERVIVPKDEDSQNNDFERRTAAAVGTTLQSPPTDAGNSDAENGTFKPNPSARSLLKSASISGSKCIGVKPTKDPEEEPIAEVNDEEAVDVLIEKAAALHT 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1488 615 Gene3D Transferase(Phosphotransferase) domain 1 212 440 - -
Glsi12g1488 615 Pfam Protein kinase domain 126 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g1488 615 CDD STKc_TDY_MAPK 125 462 - -
Glsi12g1488 615 FunFam Mitogen-activated protein kinase 114 220 - -
Glsi12g1488 615 ProSitePatterns MAP kinase signature. 161 264 IPR003527 GO:0004707|GO:0005524|GO:0006468
Glsi12g1488 615 SMART serkin_6 126 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g1488 615 FunFam Mitogen-activated protein kinase 212 440 - -
Glsi12g1488 615 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 125 470 - -
Glsi12g1488 615 MobiDBLite consensus disorder prediction 515 531 - -
Glsi12g1488 615 Gene3D Phosphorylase Kinase; domain 1 142 463 - -
Glsi12g1488 615 MobiDBLite consensus disorder prediction 532 568 - -
Glsi12g1488 615 MobiDBLite consensus disorder prediction 22 46 - -
Glsi12g1488 615 ProSiteProfiles Protein kinase domain profile. 126 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g1488 615 FunFam Mitogen-activated protein kinase 441 463 - -
Glsi12g1488 615 MobiDBLite consensus disorder prediction 22 36 - -
Glsi12g1488 615 ProSitePatterns Protein kinases ATP-binding region signature. 132 156 IPR017441 GO:0005524
Glsi12g1488 615 SUPERFAMILY Protein kinase-like (PK-like) 122 422 IPR011009 -
Glsi12g1488 615 MobiDBLite consensus disorder prediction 496 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1488 Glsi-ChrGlsi12 31947653 31953448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1488 112 615 MAP Kinase Gene Family AT3G18040 83.597 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Glsi12g1488 Pkinase 2e-67 CL0016