Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1485 ATGAAGAACATTCTTAAGAAGCTTCATATCATGTCCCATCAATCAGAAGATGCAGGAGGGTCTACTTCATCAAGGGGCAACAAGTCCAATGGTGGTTCATCCCCTAAGAAGCTTTCGCACTCTCGGTCCCCTCAAATTCCAGAGCATAAACCCTCTTCAGGGCTTTCGAGTTGGTTGTATTCAGTTTCCAACAGGAAAGGTTCTGGCCCTTCATCTTCGAACTTGACAGGAGGAGAAAGAGTGGAACCATCTGATTCGGGGAGCATTGGTGGTTTGGATATTGTTCCTGTTTCGGCGAGGCGTGATTCAGATTCTAGCACTTCGAAAGATCCTGAAGTAGAGGAAGAGTATCAGATACAACTGGCTTTAGAGCTGAGTGCTAAGGAGGATCCCGAGGCTGTGCAGATTGAAGCTGTTAAGCAGATCAGTTTGGGCTCTTGTGACCCCGATAATACACCAGCTGAAGTTGTGGCTTACCGATACTGGAATTACAATGCTCTTGGCTATGATGACAAGATCTTGGATGGATTCTATGATCTTTACGGGATCTTGATTGAGTCAAGCTCTGCAAGAATGCCTTCCCTTGTTGATCTGCAAGGAACATCAACCTCAGATAGTGTCACATGGGAAGCAGTCTTGGTCAATAGGGCTGCTGATTCTAATTTGTTGAAACTTGAGCAAAACGCTCTAGAGCTGGCAGTCAAGTCAAGACCAGATTTTGAAGTAGTAAATAGAAATTTGGTGCAGAAGCTTGCCATATTAGTGGCTGACTATATGGGTGGACCAGTTGCGGATCCTCAAAGCATGACAAGAGCATGGCAGAGTCTCAGTTACAGTCTGAAAGCAACCCTGGGCAGCATGGTTTTGCCACTTGGTTCTTTGACCATTGGATTGGCTCGGCATCGTGCATTGTTATTTAAGATTTTAGCTGATTGTTTGGGCCTCCCATGTCGGTTGGTGAAAGGGCAGCAATATACAGGTTCAAGTTCGGATGATGTGGCAATGAACTTTATCAAGATTGATGATGGAAGGGAGTACATTGTTGACCTAATGGCAGATCCTGGAACGCTTATTCCAGCTGATGCAACTGGATCGCATATTGAGTATGATGAATCATTATTTTTGGCCAGTCCTTCATCAAGAGACCTTGATTCATCTCATGTAGCGTCGTCCAGCAGTGGTATTGGAAGTTCATCTGAAGAAACTTCAGACTTTGGGGCATTGGATAAATCAAACAGGTCAAAGCATTTTGCATATGCATGGAAGGAATCTGATGTAAGCAGTCCCACTACAGGCAAGGAAGAATCGAAGGGACCCTTGTATGATTTCAAAAGTCCCCCCAATGTTCAGAAGATCATAGTGCGGGAAACTCCTGGTAGACCTAATTATCCATATATGCATGCAAGATCTCCTTCTTGGACTGAAGGGATCGGTTCCCCTATGGTACGTAGAATGAAAGTCAAAGATGTTTCACAGTATATGATTGATGCTGCTAAGGATAATCCTCACTTGGCGCAAAAGCTTCATGATGTCTTACTTGAAAGTGGTGTTGTTGCTCCTCCAAACTTATTTTCTGAAATTTATCATGAGCAATTAGGTGCCCCATTGCCGACTGAAGAAAAAGATGAACATAAACAAGGATGTGTACAGCAAGAAACTGAGGTTGATGGTAATCTTGGTCCTGCTCGATTTTTGCCTCCTTTGCCTCACTACAGAGTTCATCCCAAAGCAAGTACTAGCAGTCAGCCGGAGCATTCTAAGCCTGTAGAAGGTTTAGGGATCAACCTTCCTGTTGATTCAAGGGAAGCAGCTGGACAGCACATACCATCACAAGCCGAAGTAACTCCTATAAAATATGGGAAAAGTGTCCCTGTTGCTGCAGCTGCAGCTGCAGCTGCTGCTGTTGTTGCATCTTCCATGGTAGTTGCTGTGGCAAAGTCAAGCGCTGACTCAAATATTGAGCTTCCTGTAGCAGCAGCTGCTACTGCAACTGCTGCAGCTGTAGTAGCAACCACTGCAGCTGTCAGTAAACAATATGAGCAGGGTAGTCGAAGTGATGGAGATACGGATGGTGCTTATGAGCCAAAGGGTAGTGGCGACAGAGAGCGTGGTGCTTTAGGTGCAAACTCAGAAGGCGAGAGAACATCTGATAGATCAGTTAGTAATGATAGCACAAAATCTGATTCTGCGCTAGATGATGTTGCTGAGTATGAGATTCCATGGGAGGAAATCACGCTGGGTGAGCGTATCGGACTTGGATCATATGGAGAGGTGTACCGTGGTGAATGGCGAGGAACTGAAGTTGCTGTAAAGAGGTTTCTAGATCAAGATATCTCTGGTGAATCACTTGAAGAATTCAAAAGTGAGGTCCAAATAATGAAAAGATTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTAACTCGACCTCCAAATCTTTCAATTGTTACAGAATTTCTTCCCAGAGGCAGTTTGTATAGATTAATTCACCGTTCTAACAATCAATTAGATGAGCGAAGGCGATTGAGGATGGCTCTTGATGCTGCTCGAGGAATGAACTATCTGCACAACTGCAATCCGTTGATAGTCCATCGTGATCTGAAGTCCCCAAATCTTCTTGTTGACAAAAATTGGGTTGTAAAGGTATGTGATTTTGGGTTATCACGAATGAAGAATAGTACATTCCTTTCTTCCAGATCAACCGCAGGGACTGCTGAGTGGATGGCTCCCGAAGTGTTAAGAAATGAACCTTCAGATGAAAAGTGTGACGTTTATAGCTTCGGGGTGATATTATGGGAGCTGTCTACGCTGCAGCAACCCTGGGGGGGAATGAATCCAATGCAAGTTGTTGGTGCAGTGGGTTTCCAACATCGCCGTCTTGACATTTCAGATGATATGGATCCTGCCATTGCAGATATTATCAGGAAATGCTGGCAGACAGATCCAAAGCTGAGACCCACATTTGCTGAAATCATGGCTGCTCTGAAGCCGTTGCAGAAGCCAATAACTGGATCTCAAGTGCCTAGACCTGGTGCACCAGGGGCTCAGTCAAAACGAGTTGCAGAAGATCCTGCAGGATAG 3084 0.4488 MKNILKKLHIMSHQSEDAGGSTSSRGNKSNGGSSPKKLSHSRSPQIPEHKPSSGLSSWLYSVSNRKGSGPSSSNLTGGERVEPSDSGSIGGLDIVPVSARRDSDSSTSKDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKILDGFYDLYGILIESSSARMPSLVDLQGTSTSDSVTWEAVLVNRAADSNLLKLEQNALELAVKSRPDFEVVNRNLVQKLAILVADYMGGPVADPQSMTRAWQSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKILADCLGLPCRLVKGQQYTGSSSDDVAMNFIKIDDGREYIVDLMADPGTLIPADATGSHIEYDESLFLASPSSRDLDSSHVASSSSGIGSSSEETSDFGALDKSNRSKHFAYAWKESDVSSPTTGKEESKGPLYDFKSPPNVQKIIVRETPGRPNYPYMHARSPSWTEGIGSPMVRRMKVKDVSQYMIDAAKDNPHLAQKLHDVLLESGVVAPPNLFSEIYHEQLGAPLPTEEKDEHKQGCVQQETEVDGNLGPARFLPPLPHYRVHPKASTSSQPEHSKPVEGLGINLPVDSREAAGQHIPSQAEVTPIKYGKSVPVAAAAAAAAAVVASSMVVAVAKSSADSNIELPVAAAATATAAAVVATTAAVSKQYEQGSRSDGDTDGAYEPKGSGDRERGALGANSEGERTSDRSVSNDSTKSDSALDDVAEYEIPWEEITLGERIGLGSYGEVYRGEWRGTEVAVKRFLDQDISGESLEEFKSEVQIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRSNNQLDERRRLRMALDAARGMNYLHNCNPLIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKNSTFLSSRSTAGTAEWMAPEVLRNEPSDEKCDVYSFGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDISDDMDPAIADIIRKCWQTDPKLRPTFAEIMAALKPLQKPITGSQVPRPGAPGAQSKRVAEDPAG 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1485 1027 MobiDBLite consensus disorder prediction 385 407 - -
Glsi12g1485 1027 MobiDBLite consensus disorder prediction 1001 1027 - -
Glsi12g1485 1027 MobiDBLite consensus disorder prediction 15 81 - -
Glsi12g1485 1027 FunFam Serine/threonine-protein kinase isoform 1 735 822 - -
Glsi12g1485 1027 Gene3D Phosphorylase Kinase; domain 1 737 821 - -
Glsi12g1485 1027 MobiDBLite consensus disorder prediction 385 405 - -
Glsi12g1485 1027 CDD STKc_MAP3K-like 750 996 - -
Glsi12g1485 1027 FunFam Serine/threonine-protein kinase CTR1 823 1006 - -
Glsi12g1485 1027 SMART serkin_6 744 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g1485 1027 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 160 1001 - -
Glsi12g1485 1027 MobiDBLite consensus disorder prediction 677 731 - -
Glsi12g1485 1027 Pfam Ethylene-responsive protein kinase Le-CTR1 154 358 - -
Glsi12g1485 1027 ProSitePatterns Protein kinases ATP-binding region signature. 750 771 IPR017441 GO:0005524
Glsi12g1485 1027 Gene3D Transferase(Phosphotransferase) domain 1 823 1006 - -
Glsi12g1485 1027 Pfam Protein tyrosine and serine/threonine kinase 744 996 IPR001245 GO:0004672|GO:0006468
Glsi12g1485 1027 ProSitePatterns Serine/Threonine protein kinases active-site signature. 863 875 IPR008271 GO:0004672|GO:0006468
Glsi12g1485 1027 MobiDBLite consensus disorder prediction 423 442 - -
Glsi12g1485 1027 MobiDBLite consensus disorder prediction 539 560 - -
Glsi12g1485 1027 MobiDBLite consensus disorder prediction 1 115 - -
Glsi12g1485 1027 SUPERFAMILY Protein kinase-like (PK-like) 726 994 IPR011009 -
Glsi12g1485 1027 MobiDBLite consensus disorder prediction 683 701 - -
Glsi12g1485 1027 PRINTS Tyrosine kinase catalytic domain signature 818 831 IPR001245 GO:0004672|GO:0006468
Glsi12g1485 1027 PRINTS Tyrosine kinase catalytic domain signature 923 945 IPR001245 GO:0004672|GO:0006468
Glsi12g1485 1027 PRINTS Tyrosine kinase catalytic domain signature 857 875 IPR001245 GO:0004672|GO:0006468
Glsi12g1485 1027 PRINTS Tyrosine kinase catalytic domain signature 967 989 IPR001245 GO:0004672|GO:0006468
Glsi12g1485 1027 PRINTS Tyrosine kinase catalytic domain signature 904 914 IPR001245 GO:0004672|GO:0006468
Glsi12g1485 1027 ProSiteProfiles Protein kinase domain profile. 744 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1485 Glsi-ChrGlsi12 31920580 31929307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1485 1 1011 MAP Kinase Kinase Kinase AT1G73660 64.167 0.0 1183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Glsi12g1485 PK_Tyr_Ser-Thr 2.7e-67 CL0016