Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1470 ATGGCGGATTCACCCACGCTCAATTTGGACATGGATAAAATGCTTGGCCTTCTAAGGGTTCGCATCAAGCGTGGCGTCAACCTCGCAGTTCGTGATGTTCGTAGCAGCGATCCATACGTCGTCGTCAAGATGGGCAAGCAGAAACTCAAGACTCGCGTAATTTATAAGGATATTAATCCTGAGTGGAATGAAGACCTTACGCTTTCTGTCTTAGACCCGGAAATTCCGATCACAATGACCGTGTATGACCATGACACTTGGAGCCCAGATGACAAAATGGGATATGCTGAAATTGATATCTCACCATATATAGAAGCCTTGAAGATGGACTTACAAGGCCTCCCAAGTGGCACTATCATCACAAGAATACAACCAAGCAGACAAAACTGCCTGGCAGAGGAAAGCTGCATAATTTTCAGTAACGGCAAGATTGTCCAAGACATTGTCCTCAGATTGCGAAACGTGGAATGTGGTGAACTGGAAATCCAATTGCAATGGATTGAGCTTCCAGGGCTAAGAATCTCTGGTTTGTCATGGTCTTCATCAGAAGATCTTCTGGTCTGTTTTTGTTTTTTCTCCCTTCACCTGTTGCTGAGACCCTCAAATTTCATTTCTGCAAAGGGAACTCAGCAAGAATTACTCGTAAGTTCTTCAAAACAGCCTGTGAGGAAAAGAGGAAATTGTGATGGGTGCAAGCTTGCTCGCAACTCTCAAAGCTGA 720 0.4458 MADSPTLNLDMDKMLGLLRVRIKRGVNLAVRDVRSSDPYVVVKMGKQKLKTRVIYKDINPEWNEDLTLSVLDPEIPITMTVYDHDTWSPDDKMGYAEIDISPYIEALKMDLQGLPSGTIITRIQPSRQNCLAEESCIIFSNGKIVQDIVLRLRNVECGELEIQLQWIELPGLRISGLSWSSSEDLLVCFCFFSLHLLLRPSNFISAKGTQQELLVSSSKQPVRKRGNCDGCKLARNSQS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1470 239 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 16 126 IPR035892 -
Glsi12g1470 239 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 13 171 IPR044562 -
Glsi12g1470 239 CDD C2_ArfGAP 15 158 - -
Glsi12g1470 239 Pfam C2 domain 16 102 IPR000008 -
Glsi12g1470 239 Gene3D C2 domain 2 126 IPR035892 -
Glsi12g1470 239 ProSiteProfiles C2 domain profile. 1 113 IPR000008 -
Glsi12g1470 239 SMART C2_3c 17 112 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1470 Glsi-ChrGlsi12 31855519 31861544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1470 48 176 C2H2 Transcription Factor Family AT1G70790 57.252 2.55e-48 154