Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1455 ATGGTCTTCAAGGGCAGGTTTTTTAACTTCAAGAAATCCGACTCTTCCAGCTCCGATGGATCACCCCATAGCCAGCGATCGATTGGGTCCAACTCCCCCAGCAGATCCGAGAAGAAGAAGGCGAAATCAGCTGACAAAGAACCCCGGATCGCTAACAGCAGTAATACTGGCACTGGCAGCGCGTTCGGTGCCGCCGCGGCATGCCGCCAAACGCAAGTGAAGGACGGAACAAAGAAGAAGGAAAGTCAAACTCGAGCAGAGTCCCGTTGGACATCATCGAACCCTGGCTCCGCCGGGGAATCGAGTTCCACTTCGTTCCCGGGCTCTGGGTTGAAGTCAAAGAAGGTTGCGGCAGCGGCGGCTGATGGGAAGGAATCGCCGTCATCGTCGGTTTCGCCAATTTTGGCATCGTCCCTTGGATTGAATAGGATAAAGACGAGATCAGGACCCCTGCCACAGGAGAGCTTCTTCAGTTTTAGGAGTGATAAGGGGTCGACACTTGGTGCAAGTAATCTCTCCAGACCTGGTGGTGATGGGAGTTCAGGGTCAGGAGGATTGAGAAAGAAGAAGGACCCGGTGCATCACAGTAGAGTGGCGTTTCAAGGGAGTTCTGGAAGCGGAACTTGGGTTGATAACGGGAGCAATTCGGATAGTATGTCGATTGGGAGTGCTCCGTCCAGGGACCAGAGTCCGAATATATTGCCACGGTCGCGGCTACAGAACGGAGAATCCTCCTCCGAAACAGGGAGACAGGAATTGACACAGGCTCAGTCTGAAGGCTTAAGAAGTGAAGATGTTTGCACTCCAGAGGCATCATATGATTATGAAAACCAAAAAGAGTCCGAATCTCCTCGTTTTCAAGCTTTATTACGTGTCACAAGTGCACCCAGAAAGAGGTTTCCTGCTGACATTAAGAGTTTTTCTCATGAGCTTAATTCCAAAGGTGTCTGGCCTTTTCCATTTTCAAAGCCTCGGGGATTAAATAACTTGGAGGAGATCTTGGTTGTTATTAGGGCAAAGTTTGATAAAGCAAAAGAAGAAGTAAACTCAGATCTGGCTATTTTTGCAGCAGACCTGGTTGGAATTCTTGAAAAAAATGCAGATACACATCCTGAGTGGCAAGTGACGATTGAGGACTTGCTAATTTTGGCTAGGAGCTGTGCTATGACTTCAGCTGGGGAGTTTTGGCTTCAGTGTGAAGGCATAGTTCAGGAGTTAGATGATAGACGTCAAGAACATCCTCCAGGGGTGCTCAAGCAGCTACACACTCGAATGCTTTTCATTCTCACGAGGTGTACCAGATTGTTGCAATTCCACAAGGAAAGTGGTTTGGCTGAGGATGAACATGTTTTTAATCTCCGTCAATCCAGGGTCTTGCACTCTGCTGAAAAACGGATTCCTCCTGGTTTGGGAAGGGATGACAAAAGTTCTAGTGCTACAAAGGCCTCAAACTCAAAGTCTTCAGCCAAAAAATCATATAGTCAGGAGCAGCATAGCTTGAATTGGAAGAAAGATGTTATGCAGTCAGAAAATATTTCGTCGCATACTGATGATACTTCAAAACAAGAGTCTTTTTCAGGCATGGATCAAATGGCTTCTTGGAAGAAATTCTTATCACCACCAGGTAAAATCCCAAAAGAAGCTGCTCAGTTGAAGGACCAGAATTTTGGGAGAGAAAAACCTTCGAAGTTATCAATAAATAAGAGATCAAATTCTGATGCAGATCTGTCTGCTGCTAAGCCATCTGAACTTCTTCATATCAAAGATTCCCAGGAACATACTTCCAAGCACCAACACAAAGTTTCTTGGGGCTACTGGGGTGATCACCAGAATATTGGTGAGGAGAATTCAATAATTTGTCGTATATGTGAGGAGGAAGTTCCTACTTCACATGTCGAAGACCATTCAAGGATTTGTGCAGTTGCTGATAGATGTGATCAGAAGGGTCTGAGTGTCAATGAGCGTCTTGTCAGAATTGCTGAAACTCTAGAAAAAATGATGGAATCATTTACGCAAAAGGATATCCAACAATTAGTGGGAAGTCCTGATGTTGGGAAGGTATCAAATTCAAGTATGACTGAAGAATCTGATGTTGTCTCTCCAAAACTTAGTGATTGGTCCAGAAGAGGCTCAGAGGATATGCTAGACTGTTTCCCTGAAGCTGATAATTCTGCTTTTATGGATGACCTAAAGGGATTACCCCTGATATCATGTAAAACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACTTCGTCTGCGGGGAGCATGACTCCTAGATCTCCTTTAATGACACCAAGGACGAGTCAGATTGATTTACTTTTGGCAGGGAAGGGTGCTTATTCTGAACATGATGATCTTCCACAGATGAATGAACTTGCCGATATAGCACGATGTGTAGCAAATGCACCTCTGGATGATGATCTCTCAATGTCATATCTATTGTCTTGTCTTGATGACTTGAGGGTTGTTGTAGACCGAAGAAAATTCGATGCACTTATTGTTGAGACCTTTGGAACACGCATTGAGAAGTTGATACGGGAGAAGTATTTGCAGCTTACTGAGATGGTGGAAGATGAAAAGATAGATATAACAAGCACTGTAATTGATGAAGATGCTCCCTTGGAAGATGACGTGGTTCGTAGCTTGAGAACAAGCCCTATCCATTCGTCGAAGGACCGTACCACTATTGATGACTTTGAGATTATGAAACCTATCAGTCGTGGGGCATTTGGACGGGTTTTCTTGGCTAAAAAGAGAACTACTGGGGATCTTTTTGCAATAAAGGTTCTCAAGAAGGCAGATATGATCCGAAAGAATGCTGTGGAAAGTATATTGGCAGAACGTGATATCTTAATTACAGTGCGCAATCCTTTTGTGGTTCGTTTCTTCTATTCTTTTACATGTAGCGAGAACCTGTATCTTGTCATGGAATATCTTAATGGAGGTGACCTGTATTCATTATTAAGGAATTTAGGGTGTCTAAATGAGGAAGTTGCTCGTGTATATATTGCTGAAGTGGTGCTTGCATTAGAATATTTGCATTCACTGCGGGTGGTTCATCGAGACTTGAAGCCAGACAATTTGTTGATTGCACATGATGGTCACATTAAGTTGACAGACTTTGGGCTTTCTAAAGTTGGTCTAATCAACAGCACTGATGATTTTGCTGGTCCGGCAGTAAGTGGGACATCCCTACTTAGTGAGGATGAACCCCAGTTATCTGCATCTGAGCATCAAAGGGAAAGGAGGGAGAAGCGTTCTGCTGTGGGTACACCTGATTATTTAGCGCCAGAGATACTCTTGGGAACTGGACATGGGTATACTGCAGATTGGTGGTCTGTTGGTGTCATCTTATTTGAATTGCTTGTTGGCATTCCACCCTTCAATGCAGGGCATCCTCAGACTATATTTGATAATATTCTTAATCGGAATATACCATGGCCCAGGGTGCCAGAGGAAATGAGTCCTGAAGCACAAGATCTAATTGATAGATTATTGACTGAAGATCCTAATCAGAGACTTGGATCGAGAGGGGCATCAGAGGTGAAGAAGCATGTTTTCTTCAAGGATATAAACTGGAACACACTTGCCAGGCAGAAGGCGGCATTTGTTCCTGCTTCTGAGAGTGCTCTGGATACAAGTTATTTCACAAGCCGTTATTCTTGGAATACTTCTGATGGCCTTGTATATCCAGCGAGTGATATTGAGGATTCTAGTGATGCTGATAGCTTAAGTGGCAGTAGTAGTTGCTTGAGTAATGGCCAAGATGAAGTGGGAGATGAATACCAGGGTCTTGCTGAGTTTGATTCTAGCTCGTCCGTCAATTACTCCTTTAGTAATTTCTCTTTTAAGAATCTCTCCCAGCTTGCGTCAATCAACTATGATCTTCTCACTAAGGGATGGAAAGACGATCCATCTACAAATTCTAGTGCATAA 3942 0.4409 MVFKGRFFNFKKSDSSSSDGSPHSQRSIGSNSPSRSEKKKAKSADKEPRIANSSNTGTGSAFGAAAACRQTQVKDGTKKKESQTRAESRWTSSNPGSAGESSSTSFPGSGLKSKKVAAAAADGKESPSSSVSPILASSLGLNRIKTRSGPLPQESFFSFRSDKGSTLGASNLSRPGGDGSSGSGGLRKKKDPVHHSRVAFQGSSGSGTWVDNGSNSDSMSIGSAPSRDQSPNILPRSRLQNGESSSETGRQELTQAQSEGLRSEDVCTPEASYDYENQKESESPRFQALLRVTSAPRKRFPADIKSFSHELNSKGVWPFPFSKPRGLNNLEEILVVIRAKFDKAKEEVNSDLAIFAADLVGILEKNADTHPEWQVTIEDLLILARSCAMTSAGEFWLQCEGIVQELDDRRQEHPPGVLKQLHTRMLFILTRCTRLLQFHKESGLAEDEHVFNLRQSRVLHSAEKRIPPGLGRDDKSSSATKASNSKSSAKKSYSQEQHSLNWKKDVMQSENISSHTDDTSKQESFSGMDQMASWKKFLSPPGKIPKEAAQLKDQNFGREKPSKLSINKRSNSDADLSAAKPSELLHIKDSQEHTSKHQHKVSWGYWGDHQNIGEENSIICRICEEEVPTSHVEDHSRICAVADRCDQKGLSVNERLVRIAETLEKMMESFTQKDIQQLVGSPDVGKVSNSSMTEESDVVSPKLSDWSRRGSEDMLDCFPEADNSAFMDDLKGLPLISCKTRFGPKSDQGMTTSSAGSMTPRSPLMTPRTSQIDLLLAGKGAYSEHDDLPQMNELADIARCVANAPLDDDLSMSYLLSCLDDLRVVVDRRKFDALIVETFGTRIEKLIREKYLQLTEMVEDEKIDITSTVIDEDAPLEDDVVRSLRTSPIHSSKDRTTIDDFEIMKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCSENLYLVMEYLNGGDLYSLLRNLGCLNEEVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDFAGPAVSGTSLLSEDEPQLSASEHQRERREKRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGIPPFNAGHPQTIFDNILNRNIPWPRVPEEMSPEAQDLIDRLLTEDPNQRLGSRGASEVKKHVFFKDINWNTLARQKAAFVPASESALDTSYFTSRYSWNTSDGLVYPASDIEDSSDADSLSGSSSCLSNGQDEVGDEYQGLAEFDSSSSVNYSFSNFSFKNLSQLASINYDLLTKGWKDDPSTNSSA 1313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1455 1313 MobiDBLite consensus disorder prediction 1 266 - -
Glsi12g1455 1313 MobiDBLite consensus disorder prediction 10 32 - -
Glsi12g1455 1313 MobiDBLite consensus disorder prediction 552 566 - -
Glsi12g1455 1313 MobiDBLite consensus disorder prediction 33 47 - -
Glsi12g1455 1313 MobiDBLite consensus disorder prediction 1075 1091 - -
Glsi12g1455 1313 Coils Coil 327 347 - -
Glsi12g1455 1313 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1020 1032 IPR008271 GO:0004672|GO:0006468
Glsi12g1455 1313 SUPERFAMILY Protein kinase-like (PK-like) 898 1228 IPR011009 -
Glsi12g1455 1313 MobiDBLite consensus disorder prediction 681 705 - -
Glsi12g1455 1313 ProSiteProfiles AGC-kinase C-terminal domain profile. 1191 1295 IPR000961 GO:0004674|GO:0005524|GO:0006468
Glsi12g1455 1313 MobiDBLite consensus disorder prediction 476 525 - -
Glsi12g1455 1313 MobiDBLite consensus disorder prediction 537 576 - -
Glsi12g1455 1313 MobiDBLite consensus disorder prediction 125 178 - -
Glsi12g1455 1313 ProSiteProfiles Protein kinase domain profile. 901 1190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g1455 1313 FunFam probable serine/threonine protein kinase IREH1 899 988 - -
Glsi12g1455 1313 SMART serkin_6 901 1190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g1455 1313 MobiDBLite consensus disorder prediction 87 110 - -
Glsi12g1455 1313 MobiDBLite consensus disorder prediction 199 262 - -
Glsi12g1455 1313 Gene3D Transferase(Phosphotransferase) domain 1 985 1208 - -
Glsi12g1455 1313 CDD STKc_MAST_like 907 1195 - -
Glsi12g1455 1313 PANTHER SERINE/THREONINE-PROTEIN KINASE 500 1284 - -
Glsi12g1455 1313 MobiDBLite consensus disorder prediction 462 525 - -
Glsi12g1455 1313 Gene3D Phosphorylase Kinase; domain 1 899 1219 - -
Glsi12g1455 1313 MobiDBLite consensus disorder prediction 681 700 - -
Glsi12g1455 1313 MobiDBLite consensus disorder prediction 745 764 - -
Glsi12g1455 1313 Coils Coil 653 673 - -
Glsi12g1455 1313 MobiDBLite consensus disorder prediction 1062 1091 - -
Glsi12g1455 1313 Pfam Protein kinase domain 902 1190 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1455 Glsi-ChrGlsi12 31722538 31736682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1455 1 1307 AGC Kinase Gene Family AT3G17850 66.439 0.0 1664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Glsi12g1455 Pkinase 3e-65 CL0016