Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi12g1453 | ATGCATACAGTCCACAGTCCCTCTTGCTATGCCAACCTTAATCCCGTATCTAATTTCAATCATATTCCCAACTATTTGGTTCGATCCAATGCGTTAGTTTTCTCCTGCGCGCCTCTGACTGTTAGGTGCTTCGGATTGCGTGCCATTGATTCTGAGTTTTTACCCAAATTTGGTTATTTCCAGGACCCAAGTTCTGTTTTCTCCCGTAGGAAACCCTCGCGCTGTGCAGTAGTCAGAGCCTTCGGAACTAATTACTATTCAACTTTGAAAGTTAGTAGAAATGCTTCTTTGCAAGAGATTAAGAGCGCTTACAGAAAACTAGCCCGTCAGTACCATCCAGATATGAACAAGAGCCCGGGGGCAGAAGAGAAATTCAAGGAGATAAGTGCAGCATATGAGGTTCTATCAGATGATGAGAAAAGATCTTTATATGATCGCTTTGGTGAGGCAGGTCTACAAGGAGAAAATGGAGCGTCAGCTGGTGCTTCAGGGGTTGATCCTTTTGACTTATTTGATACATTCTTCGGCGGTTCAGACAGTCTATTTGGAGGTGGTGATGAACTAGGAGGCATCAACTTCAATTTGAGAAACAATAGAAAACGTGGTCTTGATATTCGGTATGACCTTCATTTGAGCTTTGAAGAATCAATTTTTGGAGGACGGAGAGAAATTGAAGTTTCTGGTTTCCAGACGTGTAGTGATTGTGATGGTACAGGAGCTAAATCAAGGAATTGCATTAAACCATGCACAAATTGTGGTGGCAGAGGAGGAGAGATGAAAAGTCAAAAAACACCCTTTGGAATAATGTCTCAGGTTTCAACCTGCTCTAAGTGCAGTGGTCTTGGCAAGATAATCACTGATCACTGTCGAAGGTGTGGTGGCAGTGGTCAAGTGCAGTCTAAACAAACAATGGAAGTGGTCATTCCTCCTGGTGTTAATGATGGAGCCACGGTGCAAATTCGAGGAGAAGGGAATGTTGATAAGAATAGGGGTATCGCTGGTAATCTTTATATAGTCATCCATGTAGATGAAAAGCATGGAGTTTGGAGAGATGGTATTCATTTGTACTCAAAGCTTGATATTGACTTCACAGAGGCAATACTGGGGTCCGTTAAAAAGGTAGAAACTATTGAAGGTTTAAGGGATCTCCAAATTCCTTCTGGGATTCAACCTGGGGATTCAGTAAAGTTGTCACATTTGGGAGTTCCTGACATGAATAAACCATCTGTTCGAGGGGATCATTACTTCATTGTGAATGTTATAATTGCAAAAAATATAAGTGATGCTGAACGTGTACTTGTGGAGGAATTGGCTTCACTAAGAGCAGCTGCCAAAGAGGATTCTCTTTCTTCTAATGACGTTGGGATACCTAAAGGAAAATTTAGTGAATTCAGAAAGAGGAATCCTAAAGGTCGTCCAAGCATGGGAATCAAACATGACTCTCTATGGAGATCTATCAAGACCTTCTTAAGGGGAGGACAGTCTGAAGAAAGGTTTGCATCAATTAGCATGGATTCATTAACTTCATTGTGGAGATTTGGCAAGCCAAACCCATCAGTCCCAAATACCTTTTTGGTTGCTCTCATTATAACTTGTATTTTTGCCTATATAGCAAAGTTTAATTACTCTTTATTTCAGAAAAGAACCCCGTCCTCCATTAATAGAACCCCAAGTGAAAAACAGTGGGTAATGCTAAGCTACGCTGCTGGTGCTGAAGCCATAGTGCTTCTTCTCCTCACCCTCCCTGGTCTCGGCCCCCTTCGCAAGGGTCTTATCTCTGTCACCAGAAACCTCCTTAGACCCTTGGCTTCGATTGTTCCGTTCTGTCTCTTCTTGCTGATGGACATTTATTGGAAGTACGAGACAAGGCCCTCTTGTGAATCCCTCGACTCTTGCACTCCATCTGAGCGCCTTCGTTATCAGAAGTCCATAATGAAGAGTCAGCGCAATGCCCTTTTGATCGCTGCGGCTCTGATATTTTACTGGCTTTTGTACTCGGTTACTGGCCTTGTGGTTCGGGTTGAGCAGCCGAACTATCATGTGGAGAAGTTGAAGAAGGATTCAGATTGA | 2070 | 0.4285 | MHTVHSPSCYANLNPVSNFNHIPNYLVRSNALVFSCAPLTVRCFGLRAIDSEFLPKFGYFQDPSSVFSRRKPSRCAVVRAFGTNYYSTLKVSRNASLQEIKSAYRKLARQYHPDMNKSPGAEEKFKEISAAYEVLSDDEKRSLYDRFGEAGLQGENGASAGASGVDPFDLFDTFFGGSDSLFGGGDELGGINFNLRNNRKRGLDIRYDLHLSFEESIFGGRREIEVSGFQTCSDCDGTGAKSRNCIKPCTNCGGRGGEMKSQKTPFGIMSQVSTCSKCSGLGKIITDHCRRCGGSGQVQSKQTMEVVIPPGVNDGATVQIRGEGNVDKNRGIAGNLYIVIHVDEKHGVWRDGIHLYSKLDIDFTEAILGSVKKVETIEGLRDLQIPSGIQPGDSVKLSHLGVPDMNKPSVRGDHYFIVNVIIAKNISDAERVLVEELASLRAAAKEDSLSSNDVGIPKGKFSEFRKRNPKGRPSMGIKHDSLWRSIKTFLRGGQSEERFASISMDSLTSLWRFGKPNPSVPNTFLVALIITCIFAYIAKFNYSLFQKRTPSSINRTPSEKQWVMLSYAAGAEAIVLLLLTLPGLGPLRKGLISVTRNLLRPLASIVPFCLFLLMDIYWKYETRPSCESLDSCTPSERLRYQKSIMKSQRNALLIAAALIFYWLLYSVTGLVVRVEQPNYHVEKLKKDSD | 689 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi12g1453 | 689 | Gene3D | - | 232 | 296 | - | - | |
Glsi12g1453 | 689 | SUPERFAMILY | Chaperone J-domain | 83 | 186 | IPR036869 | - | |
Glsi12g1453 | 689 | PRINTS | DnaJ domain signature | 140 | 159 | IPR001623 | - | |
Glsi12g1453 | 689 | PRINTS | DnaJ domain signature | 104 | 119 | IPR001623 | - | |
Glsi12g1453 | 689 | PRINTS | DnaJ domain signature | 86 | 104 | IPR001623 | - | |
Glsi12g1453 | 689 | PRINTS | DnaJ domain signature | 120 | 140 | IPR001623 | - | |
Glsi12g1453 | 689 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 199 | 342 | IPR008971 | GO:0006457|GO:0051082 | |
Glsi12g1453 | 689 | Hamap | Chaperone protein DnaJ [dnaJ]. | 81 | 467 | IPR012724 | GO:0005524|GO:0006457|GO:0009408|GO:0051082 | |
Glsi12g1453 | 689 | Gene3D | DnaJ domain | 82 | 183 | IPR036869 | - | |
Glsi12g1453 | 689 | ProSiteProfiles | Zinc finger CR-type profile. | 219 | 301 | IPR001305 | GO:0031072|GO:0051082 | |
Glsi12g1453 | 689 | CDD | DnaJ | 84 | 137 | IPR001623 | - | |
Glsi12g1453 | 689 | Gene3D | - | 202 | 338 | - | - | |
Glsi12g1453 | 689 | FunFam | Molecular chaperone DnaJ | 224 | 301 | - | - | |
Glsi12g1453 | 689 | Pfam | DnaJ C terminal domain | 205 | 421 | IPR002939 | - | |
Glsi12g1453 | 689 | CDD | DnaJ_zf | 232 | 296 | IPR001305 | GO:0031072|GO:0051082 | |
Glsi12g1453 | 689 | CDD | DnaJ_C | 204 | 426 | - | - | |
Glsi12g1453 | 689 | Pfam | DnaJ domain | 84 | 145 | IPR001623 | - | |
Glsi12g1453 | 689 | Gene3D | - | 349 | 440 | - | - | |
Glsi12g1453 | 689 | SUPERFAMILY | DnaJ/Hsp40 cysteine-rich domain | 219 | 299 | IPR036410 | - | |
Glsi12g1453 | 689 | SMART | dnaj_3 | 83 | 140 | IPR001623 | - | |
Glsi12g1453 | 689 | Pfam | DnaJ central domain | 232 | 296 | IPR001305 | GO:0031072|GO:0051082 | |
Glsi12g1453 | 689 | ProSiteProfiles | dnaJ domain profile. | 84 | 148 | IPR001623 | - | |
Glsi12g1453 | 689 | ProSitePatterns | Nt-dnaJ domain signature. | 125 | 144 | IPR018253 | - | |
Glsi12g1453 | 689 | FunFam | Chaperone protein dnaJ A6 chloroplastic | 81 | 187 | - | - | |
Glsi12g1453 | 689 | PANTHER | DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED | 65 | 442 | - | - | |
Glsi12g1453 | 689 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 350 | 431 | IPR008971 | GO:0006457|GO:0051082 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi12g1453 | Glsi-ChrGlsi12 | 31697928 | 31705826 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi12g1453 | 68 | 145 | C2H2 Transcription Factor Family | AT1G74250 | 40.476 | 1.04e-07 | 53.1 |