Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1438 ATGGATGCACTATTGTGCGCAATCAGAATCCATGAAGAGTTTGTCATCCCAGGAGAAGTGATTATGGAGCAAGGAAATGTAGTAGATCAACTTTACCTTGTATGTTATGGTGAGCTGGTAGGAATTCTGGATGAGCTAAGAAGGGAAGATGACGAGAGAGAAGAGCTAATTAAGCTATTTCAAACCTATAGTTCCTTTGGCGCGGTTTCTTTTCTTTGCAATATGCCTCAACCTTATATGGTACGAGCTCGCGAATTTTGCAAGGTTTTGCGACTTGATAAGCAATCCTTTACAGAAATACTGAAGATATACATTTCAGATGGTCGAGTTATCTTGAACAATCTTCTTGAGGTGTGCTTCACCCTGACTACTGGGAACCATGAAACGGAGCTTGCTATGAGGAATAATTGTGCTGCCTATGAGGAGGACTTCTATCTTCTGAAACGTCTGATTGGATCCAGAGCAGATCCCAACAAAATTGATTATGGTGGAAGATCACCCTTGATATCGGGAGAGCCACCGGAAGAGACTGTGGGATATGTCGATATTGCTTGCTTTCTTATTGAACAAGGAGTGAATATCAATTTCTCAGATAAGTTAGGGAATACTCCCTTGCTTGAAACCATAAAGAATGGGCACGAAGAAGTAGCTTCTTTAATTGTAAATGCTGGGGCTACTCTTACCATTGATGATGCTGGGAATTTTCTCTGCATTAATGTTGCTAAGAATGAGTCGGAACTTTTAAGAAAGATTTTGGCCCATGTTATTAATCCAAATTCCAGAAATTATGATCAACGAACGCCTCTTCACGTAGCTGCTTCTGAGGGTGGAAATAGGAATATGATCAAAATGCTTGAAGTTGCAAAAATTTCTCAGCTGGCGGAGTTATCTAATAGTATTCAAGAAACTCACGAACATTGTGGTAAAATCCTTGATGCAGACCTGATTAGCAATGATGAGAAGCTATTTCTAGTAAGTGAAGCACAGTATGAGTTGCAAAAAGTGAAAGAATGTTCTGGTCATCCAAAATTGGAATGGAGCAGCGGTCAAACAGAAAGGAAAGAGGGGAGAATGAGTTTTCTTAAACCCAATGAATTAGAGCCTGAAAACAAAAAAAGGGGGAACCAGACATCTTTTCCTGCTCAAAAGAAGAAGAAGAAAATGGAGAAGCTGAGATATGATAGTCTGGAGCTTCGTCCTTTTATTAGGCCTGTCCTATGTCCCTATTATGCTATTCTCCCCATTCTCTCCAGATTACAACTTTTAGAGGGGGAAATGGAAGTGATTGGAGAGAACTACAAGATATGGAAACAAAGCTTGTTCTGTCCGTATGGTGGTTAA 1341 0.4012 MDALLCAIRIHEEFVIPGEVIMEQGNVVDQLYLVCYGELVGILDELRREDDEREELIKLFQTYSSFGAVSFLCNMPQPYMVRAREFCKVLRLDKQSFTEILKIYISDGRVILNNLLEVCFTLTTGNHETELAMRNNCAAYEEDFYLLKRLIGSRADPNKIDYGGRSPLISGEPPEETVGYVDIACFLIEQGVNINFSDKLGNTPLLETIKNGHEEVASLIVNAGATLTIDDAGNFLCINVAKNESELLRKILAHVINPNSRNYDQRTPLHVAASEGGNRNMIKMLEVAKISQLAELSNSIQETHEHCGKILDADLISNDEKLFLVSEAQYELQKVKECSGHPKLEWSSGQTERKEGRMSFLKPNELEPENKKRGNQTSFPAQKKKKKMEKLRYDSLELRPFIRPVLCPYYAILPILSRLQLLEGEMEVIGENYKIWKQSLFCPYGG 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1438 446 ProSiteProfiles cAMP/cGMP binding motif profile. 1 101 IPR000595 -
Glsi12g1438 446 Gene3D Jelly Rolls 3 124 IPR014710 -
Glsi12g1438 446 SUPERFAMILY Ankyrin repeat 99 285 IPR036770 -
Glsi12g1438 446 MobiDBLite consensus disorder prediction 363 386 - -
Glsi12g1438 446 ProSiteProfiles Ankyrin repeat profile. 200 232 IPR002110 GO:0005515
Glsi12g1438 446 SMART ANK_2a 264 294 IPR002110 GO:0005515
Glsi12g1438 446 SMART ANK_2a 163 196 IPR002110 GO:0005515
Glsi12g1438 446 SMART ANK_2a 200 229 IPR002110 GO:0005515
Glsi12g1438 446 FunFam Potassium channel KAT2 3 121 - -
Glsi12g1438 446 Pfam Cyclic nucleotide-binding domain 17 102 IPR000595 -
Glsi12g1438 446 ProSiteProfiles Ankyrin repeat region circular profile. 200 231 - -
Glsi12g1438 446 CDD CAP_ED 9 112 IPR000595 -
Glsi12g1438 446 Gene3D - 132 305 IPR036770 -
Glsi12g1438 446 SUPERFAMILY cAMP-binding domain-like 7 117 IPR018490 -
Glsi12g1438 446 PANTHER POTASSIUM CHANNEL AKT1 8 381 IPR045319 GO:0005249|GO:0006813
Glsi12g1438 446 Pfam Ankyrin repeats (many copies) 242 285 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1438 Glsi-ChrGlsi12 31621867 31633282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1438 7 295 Ion Channels AT5G37500 46.708 2.76e-86 276