Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1428 ATGCCCCAGAATAGGATTTTCAATGACCCATCATCGAATCCGATTCCTGATCTTGCCCTGCACATTAGCCTTCCAAACAGTGCTCCTTCTTCAATTTGCACCGGCGCCCATGAAGAAGGGGATTCTTCCTTTGATATATGGCGAACAGATGTTGATGGCCTCAAATCCCACAGTGAGAGCTCTATCAGAGGCAGCCCACAAGCAGACACAGAGCTCTCTCTGGCCAATCCCACAAGTGCCTCTGAGGTCGAGAGCCCCTGGAGGAGAAACTTCGTTAGAGGCAGAGAAGAAGTTGCAGCTAGGCAAACAAATCATGGGGTTTCAGAGGGATTAAGACCCATCAAAGGAATCCCACTTTACAATAACTGTTCGTTTTCCTTTTCTCCTTTGGACAACAATTTCATAGGGAGGGACTCCAAGATTTCTCTATACCCAGTTTCATATCCTTCTTGTTCTGCTATTAATTCGGGTTCTTATAGGCCTTATGATAGTATTGGGGGTGTAGAACCAATCTCAAGGTTTAATGGGATAACCATGGAGAGTCTAAGACCGGGGCAGCAGTTTCAGTACTTGAATCAGCAGCAGCAGCAGCAGCAGTTTGGGATTGGAGCTTCTGATTTCTCAAACGGATTTATGAGGTCGAGAATATTGCCAAGACTGCAGAATAAGAGGAACATGAGGGCTCCAAGAATGCGTTGGACTAGTTCTCTTCATGCTCGATTTGTCCATGCTGTTGAGCTCCTTGGGGGCCATGAAAGGGCTACACCAAAGTCAGTTTTGGAGCTCATGGATGTCAAAGATCTAACTCTAGCTCATGTCAAGAGCCATTTGCAGATGTATCGAACTGTTAAGAACACTGATAAACCTGCAGCTTCCTCAGATGGAGATGGAGACGGAGATGGAGAGGGAGACGAAGATTTCATGACTCTAACGCCACCACTAGTTAATCAAAATGAGAACTGTTTATTACCCATTAAGAGAGGACCTACAAATGCATCTCTAGAGCTTCCGGATATGGGCTACTCTACCAGCAACAGCTTGTGGGGTAATTCTTCCAGTAGAGGAGCATGGACACAAGCTAGTTCCAGAGATCTGGATGGGCTTAGATCAGCAGATATCCTATCATCTCAGCACACAGTTGGGAAACAGTCTCAGGAAAGCAATTTTTTACAGTCAAGAAGCTTCGAGGGTTCAAATCCGGACTCTGAGAATCCAAGCTTGGAGTTCACCTTAGGGAGATCAACTTGGCAAGGCAACGAACATGCCTGA 1269 0.4602 MPQNRIFNDPSSNPIPDLALHISLPNSAPSSICTGAHEEGDSSFDIWRTDVDGLKSHSESSIRGSPQADTELSLANPTSASEVESPWRRNFVRGREEVAARQTNHGVSEGLRPIKGIPLYNNCSFSFSPLDNNFIGRDSKISLYPVSYPSCSAINSGSYRPYDSIGGVEPISRFNGITMESLRPGQQFQYLNQQQQQQQFGIGASDFSNGFMRSRILPRLQNKRNMRAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPAASSDGDGDGDGEGDEDFMTLTPPLVNQNENCLLPIKRGPTNASLELPDMGYSTSNSLWGNSSSRGAWTQASSRDLDGLRSADILSSQHTVGKQSQESNFLQSRSFEGSNPDSENPSLEFTLGRSTWQGNEHA 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1428 422 NCBIfam myb-like DNA-binding domain, SHAQKYF class 229 282 IPR006447 GO:0003677
Glsi12g1428 422 MobiDBLite consensus disorder prediction 58 81 - -
Glsi12g1428 422 Gene3D - 228 285 - -
Glsi12g1428 422 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 16 421 IPR044847 GO:0000976|GO:0006355|GO:0010158
Glsi12g1428 422 Pfam Myb-like DNA-binding domain 230 281 IPR001005 -
Glsi12g1428 422 FunFam Myb family transcription factor 227 285 - -
Glsi12g1428 422 SUPERFAMILY Homeodomain-like 226 283 IPR009057 -
Glsi12g1428 422 MobiDBLite consensus disorder prediction 284 312 - -
Glsi12g1428 422 MobiDBLite consensus disorder prediction 377 422 - -
Glsi12g1428 422 MobiDBLite consensus disorder prediction 56 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1428 Glsi-ChrGlsi12 31567335 31573529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1428 15 417 G2-like Transcription Factor Family AT5G16560 37.647 1.96e-57 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi12g1428 None None None