LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi12g1419	ATGGATACAGCTTTGTTGCTGCAATATTGTCCTGGCATCACATTGACAGCCTCCGTAAAACTAGGAAATGCTATTAAATCTGAAATTCAATTCAACCTTACACATTTAAACCTGATGTTTAATTTAAGAGTAAAATTTTGTCCTGCATTTTCTTCGTCGCTTGCTGCTGCTCTAATGGACGGGGATAATGGTCTTAACATACGTAATTGGGGTTACTATGAACCCACAACGTCCTTTAAGAGCCACCTTGGGCTCCAGCTTATGTCCTCCATGCCTGAAAAACCTCTGCTTGGAGGACGCAATGCTGCAATTTTATCTGGTACGAATGGGGCATTTCACCATAGGGACATTGGGATGCCACAAGCAACATATCCAATGGATTACATGAGGGATGCTTGGATTAGTCAGAGAGAGAAGTATCTGAATATGATACCTACAAACCCCAATTATGCTGTTATTCCCGATACATCTTCAGCCCATCATATGCAAATGATTCAACCACCTGACCTAGTTAAGGAAGAAAGACCGATGGAAGAGCCAGTCGTTGAGAAGACCAATGACACTAGCAAGAAAAGACAGGGGCCCAAGGTGCCCAAATCTCCTAAGGCAAAGAAACCCAAGAGAGGGCCTCGTGTACCAAAGGACGAGAATGCTCCTTCAGTTCAACGGGCAAGGACTGCAAAGAGAACAACTGAAATTGTAATAAACGGAATAGATATGGATATTTCTAGTATTCCGATTCCAGTTTGTTCATGCACTGGGACACCTCAACAGTGTTATAGATGGGGCTCTGGTGGTTGGCAATCTGCATGCTGCACAACAGGCATGTCAATGTATCCCTTGCCTATGAGTACCAAGCGGCGTGGTGCAAGGATAGCTGGAAGAAAAATGAGTATTGGAGCTTTTAAGAAAGTCTTAGAGAAACTTGCAGCCGAGGGTTATAACTTCTCTAATCCAATTGATTTGAGGACTTATTGGGCAAGACATGGCACCAACAAGTTTGTCACTATCAGTACATGGGAATACAATCTTGTGGTTGATTGGTATAGGGAACTGGCAAATGAGATATTGTCGAATGACATGTAG	1086	0.43	MDTALLLQYCPGITLTASVKLGNAIKSEIQFNLTHLNLMFNLRVKFCPAFSSSLAAALMDGDNGLNIRNWGYYEPTTSFKSHLGLQLMSSMPEKPLLGGRNAAILSGTNGAFHHRDIGMPQATYPMDYMRDAWISQREKYLNMIPTNPNYAVIPDTSSAHHMQMIQPPDLVKEERPMEEPVVEKTNDTSKKRQGPKVPKSPKAKKPKRGPRVPKDENAPSVQRARTAKRTTEIVINGIDMDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTGMSMYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWARHGTNKFVTISTWEYNLVVDWYRELANEILSNDM	361

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi12g1419	361	PANTHER	-	59	337	IPR010409	-
	Glsi12g1419	361	MobiDBLite	consensus disorder prediction	169	194	-	-
	Glsi12g1419	361	SMART	GAGA_bind_2	59	338	IPR010409	-
	Glsi12g1419	361	MobiDBLite	consensus disorder prediction	169	228	-	-
	Glsi12g1419	361	Pfam	GAGA binding protein-like family	59	337	IPR010409	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi12g1419	Glsi-ChrGlsi12	31490115	31493864	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi12g1419	59	337	BBR or BPC Transcription factor family	AT2G01930	51.864	4.78e-95	283

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	BBR-BPC	Glsi12g1419		GAGA_bind	1.9e-112	No_clan