Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1405 ATGGCTAAGAGATCAGATTTTGCACAGAAGCTGCTTGATGATCTGCGCCTGAGGAAAGAACGAATGGCTACATCTCAGAGGTCAACCCAATCCAACCAGCTTCCTATAGGCAAACCCTCCCATTCACCCTATGCATATGCCTACTCCAAGCAAACATACAGAGGATCCAGAAATGTAAAAGCTAGTGAAACTATTAGTTCCAGAAGCCATAGATCAGCAAACATTGGAGAAGGCTCAAATCAGATCGTTCCATATGGGGGAGGTCAGAGCTCAGTGCAAATGGGTGATATGTCTTTTGCCCTGGCTTTTGCGTTTGAGAATGGAGGGAAATTAAGGACTGATTCTTCTTTCGCTAGTTCAATAATGGGTTTCCTTCACCAGATTAAAGGGGGAACAATGGACTATAGCAAGATGGAAAGACGAAGCAATTTGGATAGGCAACTGGCTTCAACAAGTTCCTTCCCAACTCTCTCTCCGGTGCAGATAAATGAGATATCCAAAGGTGCACAGAAATTGAACCAGATATTGAGAGCCTGCTCCAATGGTCTTAACATAGATAGATATTCAATAGAATTTGCAAAGGAACTATTACAAGGAGCCATGGATTTGGAAGAGTCCCTCAGGATGTTAGTAGATCTGCAGAAAAGTTCAGAGTCCATGATTCCCCCACAAAAGAAAAATCGGATAACATTATTAGAGGAGGAGGATGATGAGGACGACGAGAGAACAATCAAAACTTCTGAGCAAAAGCAACTGGCACGACCAACGTTTTCCTTTGACAGGCCCTCAAGACATTCCCAAACCCTTCAAGGAGTTGGAAACACTAGTCTAATGCAGAGGACACTTACTCTTGCTTACTCTAAGGAACGCAGGAACTCAAATAATGAAAAGCAAGATGTGAACAAATCAAAATTGCTTTCTCACAAGCGATCAATGAGCAACAGCTCTGATAATAAGAATCTCAATGCCTTTACAGAACAGAAAAATCAGTCAGCTTCAGTGCAATCCAACTCAGAGAAGGGCAGGATTCCAAATGTAATAGCCAGATTAATGGGGTTGGATAATCTTCCGGAGAAATTGGAATCAAAAAATACCCCACAGAAGGAATCAGTTTCTTCACAGAAAATAGAAGGAATGACATTCAAGCAAACTGCAACAGGAAGCGCCAAGAAGATTGAACTGAAGAATAAACCAACAGAGAATTTGGTGCTTCCAAAAAAGCTTAAAGTGATAGAATCCATCAATATGTCTGCAACTGAGGAAAAGAAGCTGATGTCTGGTGCAGATAAAAATTCGATCATCCAAAAGGTCAGCTCTGAGGTTGTTGTCCATAATGAACAACAACTATGGAGGGACTTGAATGGAATTAAAGTATTGAAAGGATTAGAGAAGGCCACCATCAAAGTGGACAAGCAGCATAATAGTGCAGCACAAATGAACCTCATTAGAGAAAGTCGAAGGGATTTTCAGGTGAATGGAAGAAAACAGGATCAGACAGTTAGCAGAGAACAGAAAGGAACAGTAAAGGGTAGAGCCAATGATCCACTTCTAAATAACATGCTAGCCCAGCTGGAACAAGTGCATGAAAGATGGGAAGTTGACTCTTCATTGCAGGAAGAAAAAGAAAGCGTTGGAAGTAATCTTCAATCAGAAAAGAAACATACAAACAATAACAACGTAAGCAATCAAAGGAAGTCTCAGAGTCATCTTGGAACTCAAAAACATCAAAAAGAAAAGCAGGTCCAGCATAGTGAAAAGCAAATGTTACAGGCAAGCAAACAAAAAGGGAGGGAAACAACTTCCAAGAATTCATCTAAACGTCCACATGATCTGACCAATTCTCAGAAGAGGCAGTTACTCATAAACCAAATCACATTCATTAAGCACAACTCTGCAGAAAATGTTGATGCTATGAAATTGGAAGGGTTCCCGAATAGCCAATATGATGATCTAATCAGAGATGAGGCTTCCAATGAGTACAACGTCGAAGTGAAAGAATTGATCAATAGGAAGCCAGGTCAAATTACCTCTACAAGAAATCTACAATCTGAACCAGTTAAAGGAAGGCATGGCATTGTAACAATGATGGACGAAAAAAGCGTTCATAAACTGGCCAACAAGAAGGTAAAGAATACAAGAAAGAAAAATACCGACTTGCCTGAAAAGATTGAAGAAATATTAAGTAGAAGAAACAAAACAATGTTTCATATCCCAAAACAAGTAAAGCAACAGAGTCCCATTTTGCCAGAAGCGAGACAGAGAACATCTGATAATTTTAACTTTTCAAAAGAAGCTGAGCGAGAAAGGGTCAGCATGTTGAAAGAAGCAGATGAACGCATCATTAGCTCCAATGAGTCAGTAGCTATTGGCGAACCATTGAGTGTGAGACGCCAACCACATAAAGTATCAGAACAGCCTCCTGCATTGTATAGGTCTGATGGTGGCAAAGTTCAAAGCATAGAGGAATCAGAAGTTTCAGTTCCCAATAATTTGTATCAGGGTGTTAAATTGGTGGCTACTAATGATATGCAAGATCAAGCTACTCTTATGGCAATAGATGAAGGATGCAAGTCTTGTGAAATTGCACCAAATACAATAAACGGGATTCATGTAGAGAGAATGGATATAAATTACCACTCACAATTGCAAAACAGGAGAATTTCTGAAAAAAGGATCCAAAAGCCACTAACTGAAAGCGAAAACTGCCTCAAGTGGATCTTGGCTATGAGTCAGACATTCCTCAACACTGCAGAAGCACTTTTCAGACTTAACATTCCTTTAAGCATTCTTCAAGGTGGTAGTCAGGACAGTCAAGATGAAGGCAACAAGCTTATACTAGACTGCGGCTATGAAGTGATGAAACGAAAAGGGACACGGCAAGAACTCAAAGTACATCATGGATCAAAGAAATCAATCAGTTCCACTAAAATTACATCCTTAGATGACTTGGTTAGGCAGCTGAATAAAGACATGGAGAAGTTAAAATTCTACGGAAGGAACAAAAATTCCCAAGTTGACGTTGAGGACTACCTCCCTAAAATGCTTGAAAATGATGTCTACGACAAGTATCCAGACATAGACTGTATGTGGGACTTGGGTTGGAACGAGGAGACATTTGCATTCCTCGAAAAATATGATGTTATAAGGGATATGGAAAAGCATATCCTTAATGGACTTTTGGATGAGATCACCTGGGAACTTCCGCGTATTCAGAATATGACAATTACACATTGA 3234 0.4004 MAKRSDFAQKLLDDLRLRKERMATSQRSTQSNQLPIGKPSHSPYAYAYSKQTYRGSRNVKASETISSRSHRSANIGEGSNQIVPYGGGQSSVQMGDMSFALAFAFENGGKLRTDSSFASSIMGFLHQIKGGTMDYSKMERRSNLDRQLASTSSFPTLSPVQINEISKGAQKLNQILRACSNGLNIDRYSIEFAKELLQGAMDLEESLRMLVDLQKSSESMIPPQKKNRITLLEEEDDEDDERTIKTSEQKQLARPTFSFDRPSRHSQTLQGVGNTSLMQRTLTLAYSKERRNSNNEKQDVNKSKLLSHKRSMSNSSDNKNLNAFTEQKNQSASVQSNSEKGRIPNVIARLMGLDNLPEKLESKNTPQKESVSSQKIEGMTFKQTATGSAKKIELKNKPTENLVLPKKLKVIESINMSATEEKKLMSGADKNSIIQKVSSEVVVHNEQQLWRDLNGIKVLKGLEKATIKVDKQHNSAAQMNLIRESRRDFQVNGRKQDQTVSREQKGTVKGRANDPLLNNMLAQLEQVHERWEVDSSLQEEKESVGSNLQSEKKHTNNNNVSNQRKSQSHLGTQKHQKEKQVQHSEKQMLQASKQKGRETTSKNSSKRPHDLTNSQKRQLLINQITFIKHNSAENVDAMKLEGFPNSQYDDLIRDEASNEYNVEVKELINRKPGQITSTRNLQSEPVKGRHGIVTMMDEKSVHKLANKKVKNTRKKNTDLPEKIEEILSRRNKTMFHIPKQVKQQSPILPEARQRTSDNFNFSKEAERERVSMLKEADERIISSNESVAIGEPLSVRRQPHKVSEQPPALYRSDGGKVQSIEESEVSVPNNLYQGVKLVATNDMQDQATLMAIDEGCKSCEIAPNTINGIHVERMDINYHSQLQNRRISEKRIQKPLTESENCLKWILAMSQTFLNTAEALFRLNIPLSILQGGSQDSQDEGNKLILDCGYEVMKRKGTRQELKVHHGSKKSISSTKITSLDDLVRQLNKDMEKLKFYGRNKNSQVDVEDYLPKMLENDVYDKYPDIDCMWDLGWNEETFAFLEKYDVIRDMEKHILNGLLDEITWELPRIQNMTITH 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1405 1077 MobiDBLite consensus disorder prediction 290 306 - -
Glsi12g1405 1077 MobiDBLite consensus disorder prediction 233 320 - -
Glsi12g1405 1077 MobiDBLite consensus disorder prediction 249 289 - -
Glsi12g1405 1077 MobiDBLite consensus disorder prediction 532 617 - -
Glsi12g1405 1077 PANTHER OS01G0228800 PROTEIN-RELATED 8 1067 - -
Glsi12g1405 1077 MobiDBLite consensus disorder prediction 57 80 - -
Glsi12g1405 1077 MobiDBLite consensus disorder prediction 19 41 - -
Glsi12g1405 1077 MobiDBLite consensus disorder prediction 599 613 - -
Glsi12g1405 1077 MobiDBLite consensus disorder prediction 540 569 - -
Glsi12g1405 1077 Pfam DUF761-associated sequence motif 333 358 IPR032795 -
Glsi12g1405 1077 MobiDBLite consensus disorder prediction 487 509 - -
Glsi12g1405 1077 Coils Coil 574 594 - -
Glsi12g1405 1077 MobiDBLite consensus disorder prediction 487 517 - -
Glsi12g1405 1077 MobiDBLite consensus disorder prediction 24 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1405 Glsi-ChrGlsi12 31343017 31347656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1405 1 423 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 35.897 1.39e-51 194