Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1364 ATGAAAACCATAATACGCTTGCTGCATAAGAAACTGTCCTCTTCTAAAACAAAACCTGCTTATTGTCATAATAAAATGCACAAGAGGATGCATGCAGTGAGGGCACTGGTTCCTGGAAAGAGGCCTGAAAATGAGGATTCAAATGCCTTTTCGGCTTTGACTGCACCATTTAGTGGCTCCATATCAAAAGCAATTCAAGTTTTCATTTCCAATAGACTCATTATTGGGAGCTCAGGATTTCTGTGGATTCATTTCATGTCCAGTAGAGCTGTGATTAGCTATTCTCTCCACTTTATTTCTCAAAGAATGAGAGAAAGTGTTTCAGAACCATGGCTAGTTATGATCATGATGCTATTGGCCACTGCTATATTTGCAAAATTCATACAGATCAGGTTGAAGAAGGCAGAGAAAAGAACATGCAAATTGCCACCAGGAAGAAGAGGCTGGCCTTTGATCGGTGACAGTATCAGTTGGTACAATGCTGTTGCAAGTTCTTATCCTCCTCAGTTTGTTGAAGAAATGGTGCTAAGGTATGGTAAGATATTTTCTTGCAGCCTATTTGGGAAATGGGCAGTGGTGTCATCAGATCCAAGCTTCAACCGCTTTGTCATGCAAAATGAAGGGAAATTATTCCAGTCAAGTTACCCAAAATCATTCAGAGATTTGGTTGGTAAGAATGGGGTGATCACAGTGCAAGGAGACCAACAAAGGAAACTGCATGGAATTGCCTCCAACATGATGCGCTTAGATAAGCTCAAGTTTCATTTCTTGAATGATATTCAAAAGGTCATGATTCAAACTTTGAGCAATTTCAACAACAACCAAGTCATTCGTCTCCAGGATGTTTGTAGGAAGGTAGCTATAAACCTAATGGTTAATCAATTATTGGGGGTATCAAGTGAATCTCAAATAAATGAGATGGCTCAACTATTTTCTGACTTTGTTGATGGTTGTCTATCTGTTCCCATTGACGCGCCAGGGTTTACATACCACACTGCTATGAAGGCAAGGGAGAAAATCATAAGCAAGATAAACAAGACCATAGAGTTACACAGGCAACAAGGTGCTGCAGTAGTAGGTAATGGTGTGCTTGGAAGACTACTGGAGGAAGAAAGTTTACCAGACGATGCTGTTGCAGACTTCATCATCAATCTTCTCTTTGCAGGGAATGAAACTACTACAAAAACCATGCTTTTTGCAGTCTATTTCCTCACTCAGTGTCCCAGAGCCTTGAAACAGCTACTGGATGAACAAGATTCTCTGAGGGGTAATTCTGGAGGAGAAGAAATGCTTACATGGAAGGATTACAAAGCAATGCCATTCACTCAGTGTGTTATTGATGAAACACTGAGACTTGGGGGCATTGCAATTTGGTTAATGAGAGAAGCAAAAGAAGACGTCAAGTACCAAGATTTTGTTATTCCCAAGGGATGTTTTGTGGTTCCATTTCTTTCAGCAGTCCATTTGGATGAGAATGTGTATAAAGGAGCTTCAAACTTCAATCCTTGGAGATGGATGGACCCTGAAACTGAGGAAAAGAGAAACTGGAGAAGTAGTCCATTCTATGCACCCTTTGGAGGAGGTGCTAGATTCTGCCCAGGAGCAGAGCTGGCTCGCCTTCAGATTGCTCTTTTTCTCCATTACTTTGTAACTACATATAGATGGACACAAGGGAAGGAAGATAGGATGTCATTCTTTCCCTCTGCTCGATTAGTGAATGGCTTTGAAATTCGCCTGAACAGACGGCATGATCATGAAACCAAGTGA 1767 0.4109 MKTIIRLLHKKLSSSKTKPAYCHNKMHKRMHAVRALVPGKRPENEDSNAFSALTAPFSGSISKAIQVFISNRLIIGSSGFLWIHFMSSRAVISYSLHFISQRMRESVSEPWLVMIMMLLATAIFAKFIQIRLKKAEKRTCKLPPGRRGWPLIGDSISWYNAVASSYPPQFVEEMVLRYGKIFSCSLFGKWAVVSSDPSFNRFVMQNEGKLFQSSYPKSFRDLVGKNGVITVQGDQQRKLHGIASNMMRLDKLKFHFLNDIQKVMIQTLSNFNNNQVIRLQDVCRKVAINLMVNQLLGVSSESQINEMAQLFSDFVDGCLSVPIDAPGFTYHTAMKAREKIISKINKTIELHRQQGAAVVGNGVLGRLLEEESLPDDAVADFIINLLFAGNETTTKTMLFAVYFLTQCPRALKQLLDEQDSLRGNSGGEEMLTWKDYKAMPFTQCVIDETLRLGGIAIWLMREAKEDVKYQDFVIPKGCFVVPFLSAVHLDENVYKGASNFNPWRWMDPETEEKRNWRSSPFYAPFGGGARFCPGAELARLQIALFLHYFVTTYRWTQGKEDRMSFFPSARLVNGFEIRLNRRHDHETK 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1364 588 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 525 534 IPR017972 GO:0005506|GO:0016705
Glsi12g1364 588 PRINTS P450 superfamily signature 388 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1364 588 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1364 588 PRINTS P450 superfamily signature 532 543 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1364 588 PRINTS P450 superfamily signature 523 532 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1364 588 Pfam Cytochrome P450 143 566 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1364 588 CDD CYP90-like 175 581 - -
Glsi12g1364 588 FunFam Cytochrome P450 720B1 family 132 582 - -
Glsi12g1364 588 PANTHER CYTOCHROME P450 26 139 556 - -
Glsi12g1364 588 PRINTS E-class P450 group IV signature 169 192 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1364 588 PRINTS E-class P450 group IV signature 439 455 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1364 588 PRINTS E-class P450 group IV signature 488 506 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1364 588 PRINTS E-class P450 group IV signature 516 532 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1364 588 PRINTS E-class P450 group IV signature 379 405 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1364 588 PRINTS E-class P450 group IV signature 532 550 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1364 588 SUPERFAMILY Cytochrome P450 139 582 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1364 588 Gene3D Cytochrome P450 131 582 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1364 Glsi-ChrGlsi12 30979489 30985399 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1364 103 582 Cytochrome P450 AT1G73340 72.279 0.0 739