Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1363 ATGAGCTTGGCCCTCAACAACATAAGCTGCTTTTGCCTAGTGCTTTTGTTGTTTCTGTGTTTGAACATGGTCTTTTCTGTTGACATGAAGGACTTCCAGCCAGCAGAAAGAGATGCTTTGTTGCTTCTGAGGGATTCTTTAACTTCTGATTCCAATTTGCATGGGAATTGGACGGGACCACCTTGTATAGACAATCGGAGTAGATGGGTAGGTATCACTTGTTCAAATTGGCATGTTATTCACATTGCCCTTGAAGGGATTCAGCTTCTTGGCTCTTTACCTCCTACATTCCTACAAAACATAACTTTCTTGAGACAAGTTAACTTCAGGAACAATTCAATTTCTGGGCCCCTGCCAAACCTCACGAACTTGGTGTTCTTGAAACGTGTTCTACTTTCATATAATCACTTCTCAGGGCCAATTCCAGTAGAGTATATTGAACTGCCTAGGCTAAAGGAACTAGAGCTGCAAGAGAATTACTTAGATCGTCAAATTCCACCTTTTGATCAAACATCATTGTTGAGTTTCAATGTCTCGTATAATCATCTGGTAGGACCAATTCCTCAAACATCTGTGCTGCAAAGGTTCCCAAAGAGCTCCTTTGATAATAATTCAGATCTCTGTGGTAAGCCATTAGATAAGATATGTCCTGCTCCGCCTCCTGCCCCTTTTTCTGCACCACCTCCTGTTCTTCCTCCAAGCCCAGCAGTGGAAAAACATAAGAAGAGACTCCAAGTAACGACTATTATTTTGATTGCTGCAGCAGCTGCACTGGTCCCTTTTCTGCTCATTATTGCTTGCTTGCTCTGTAATAAAAGGGTGCATCGAAAAGAAACAACAAGAAATGAATCCGCAGGGTATGGTTTTGGAGCATGGGCACAGAATATTATGTCTTATTCAGTGAGCAATGAAGATTCCGGAAGATTGGGCAGAATGGAATTTTTCAACAAGGAAATACCAGTTTTTGATTTGGATGATTTATTAAGGGCATCAGCAGAAGTGCTAGACATTGGAGATTTAGGCACTACTTATAAAGCAACGCTTGAAACTGGTGCTGTCATCGTAGTAAAGAGACTTAATGACATGAATGAATTGAGCAAGAAGGAATTCCTCCACCATCTGCAATTGCTGGGAAGGCTGAAGCATGAAAATCTAACAGAAATTTTCTCTTTCTATTATTCAGAGGAGGAAAAGCTGGTGGTGTATGAGTTTATCTCTAATGGCACTTTGTTTGAGCTCCTTCATGAGAGTAGAGGAGTTGGAAGAACTCCTCCTGATTGGTCCACGAGACTGGCTATAATAAAAGACATAGCAAAGGGTCTAGCTTTCCTTCATCACTCTTTGCCTTCTCACAAGGTCCCTCATGCCAATCTAAGATCATCCAATGTTCTAATTCAGCAAGATAGCCAAGGTTATCATTCCAAGCTCACAGAATTTGGCTTCTTACCTTTACTTTCTGCTAAAAAATCTGCAGAAAAGCTAGCCGTCAGCAAGTCACCCGAATTTGTGCAAGGGAAGAAGCTGACACACAAAGCTGATGTGTATTGCTTTGGTATCATTATACTAGAGGTGATAACTGGGAAAATCCCCGGTGAAAACTTGGGGGAAATTGGAGAAACAACCAGTGATCTTTCGGACTGGGTAAGAATAGTGGTGAACAATGACTGGTCCACAGATATACTGGACGTAGAGATATTAGCAGCAAAAGAAGGGCATGATACCATGTTGGAGCTAACAGAAATAGCTCTACAGTGTACGGATTCGACACCGGAGAAACGGCCTAAAATGAGTGAAGTTCTGTTGAGAATAGAAGAGATAGAGCAGATGAAAACAGAGAATGACTGA 1845 0.4157 MSLALNNISCFCLVLLLFLCLNMVFSVDMKDFQPAERDALLLLRDSLTSDSNLHGNWTGPPCIDNRSRWVGITCSNWHVIHIALEGIQLLGSLPPTFLQNITFLRQVNFRNNSISGPLPNLTNLVFLKRVLLSYNHFSGPIPVEYIELPRLKELELQENYLDRQIPPFDQTSLLSFNVSYNHLVGPIPQTSVLQRFPKSSFDNNSDLCGKPLDKICPAPPPAPFSAPPPVLPPSPAVEKHKKRLQVTTIILIAAAAALVPFLLIIACLLCNKRVHRKETTRNESAGYGFGAWAQNIMSYSVSNEDSGRLGRMEFFNKEIPVFDLDDLLRASAEVLDIGDLGTTYKATLETGAVIVVKRLNDMNELSKKEFLHHLQLLGRLKHENLTEIFSFYYSEEEKLVVYEFISNGTLFELLHESRGVGRTPPDWSTRLAIIKDIAKGLAFLHHSLPSHKVPHANLRSSNVLIQQDSQGYHSKLTEFGFLPLLSAKKSAEKLAVSKSPEFVQGKKLTHKADVYCFGIIILEVITGKIPGENLGEIGETTSDLSDWVRIVVNNDWSTDILDVEILAAKEGHDTMLELTEIALQCTDSTPEKRPKMSEVLLRIEEIEQMKTEND 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1363 614 Pfam Protein tyrosine and serine/threonine kinase 333 600 IPR001245 GO:0004672|GO:0006468
Glsi12g1363 614 Gene3D Ribonuclease Inhibitor 33 218 IPR032675 -
Glsi12g1363 614 Gene3D Phosphorylase Kinase; domain 1 295 404 - -
Glsi12g1363 614 ProSiteProfiles Protein kinase domain profile. 329 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g1363 614 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 609 IPR046959 -
Glsi12g1363 614 SUPERFAMILY Protein kinase-like (PK-like) 333 603 IPR011009 -
Glsi12g1363 614 Gene3D Transferase(Phosphotransferase) domain 1 405 614 - -
Glsi12g1363 614 SUPERFAMILY L domain-like 34 199 - -
Glsi12g1363 614 Pfam Leucine rich repeat N-terminal domain 35 75 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1363 Glsi-ChrGlsi12 30972741 30974784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1363 38 612 Receptor kinase-like Gene Family AT1G68400 36.089 1.74e-110 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi12g1363 Pkinase 3.3e-29 CL0016