Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1349 ATGATGAATGACGAATCTACTCTACCTACGCCAACTCGTTTGTTTTGCGGGAACCATCCTCTGTTGACTTCTCTCCCGCCGTGCTCAGTCCTCGACGTTGCTCCAGAATTTCAGTGCAGTAATTATTGGAGTTCAGTTTCTATCATCTCAAGCATGGCGGCTAGACTTATGTTTGAGAATTCTTGTGAAGTGGGAGTGTTTTCAAAACTTACGAATGCTTATTGTTTGGTTGCCATTGGAGGTTCCGAAAGCTTCTACAGTGCATTTGAGGCCGAGTTAGCAGATGTTATCCCTGTGGTGAAAACCTCCATTGCTGGCACTCGTATTGTTGGTCGCCTTTGTGCAGGAAACAAAAATGGACTTCTCTTGCCTCATAATACCACAGACCAAGAACTTCAACATTTGAGAAACAGTCTACCTGATCAAGTTGTTGTTCAGCGCATAGAAGAAAGATTATCTGCTCTAGGAAATTGTATTGCTTGTAATGACCATGTGGCCCTCACGCACACTGATCTTGACAGGGAAACTGAGGAGATGATTGCAGATGTTCTTGGAGTAGAAGTTTTTAGGCAGACAATTGCCGGTAATATTCTTGTTGGAAGTTACTGTTCCTTCACCAATAGAGGTGGTTTGGTCCACCCACACACTTCCATTGAAGACTTGGATGAACTTTCTACGCTTCTTCAGGTTCCTTTGGTGGCTGGGACTGTGAATCGTGGCAGTGAAGTTATAGCAGCTGGGATGACCGTTAATGATTGGACAGCCTTTTGTGGTTCAGACACCACAGCAACAGAACTCTCTGTGATTGAGAGTGTTTTCAAGCTCAGAGAAGCCCAACCCAGTGCCATTGTGGATGAGATGAGGAAATCTCTTATTGATAGCTATGTCTAA 891 0.4422 MMNDESTLPTPTRLFCGNHPLLTSLPPCSVLDVAPEFQCSNYWSSVSIISSMAARLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSAFEAELADVIPVVKTSIAGTRIVGRLCAGNKNGLLLPHNTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIVDEMRKSLIDSYV 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1349 296 CDD IF6 53 274 IPR002769 GO:0042256|GO:0043022
Glsi12g1349 296 FunFam Eukaryotic translation initiation factor 6 52 276 - -
Glsi12g1349 296 SMART eIF6neu2 54 255 IPR002769 GO:0042256|GO:0043022
Glsi12g1349 296 Pfam eIF-6 family 55 254 IPR002769 GO:0042256|GO:0043022
Glsi12g1349 296 Hamap Translation initiation factor 6 [eif6]. 41 296 IPR002769 GO:0042256|GO:0043022
Glsi12g1349 296 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 52 295 IPR002769 GO:0042256|GO:0043022
Glsi12g1349 296 NCBIfam translation initiation factor IF-6 55 275 IPR002769 GO:0042256|GO:0043022
Glsi12g1349 296 Gene3D - 52 276 - -
Glsi12g1349 296 SUPERFAMILY Pentein 52 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1349 Glsi-ChrGlsi12 30856910 30861651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1349 52 296 Eukaryotic Initiation Factors Gene Family AT3G55620 88.980 2.89e-168 464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g1758 01 80051192 80065968 Glsi12g1349 12 30856910 30861651 CCT