Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1339 ATGCTGTACCAATCATATTCGAAGTTCTGGAAGATGGAGATGACGAATTTGGGGAGAGTTTTTTTGATACTGGAGATGATAATGAGTGGTTTGAGATTTGGATTAGCCGATGGTTTGAGCATGAACTACTACTTGATAAGCTGCCCCCTTGCTGAACTTGTCGTTAAGGACACAGTGAACAGAGCTTTGCAGGATGATCCCACCCTTGCAGCCGGTCTTGTTAGAATGCACTTCCATGACTGCTTCATTGAGGGGTGTGATGGATCAGTTCTGATCGATTCAACGAAGGACAACACAGCAGAAAAGGATTCACCAGCCAATTTGAGCTTGAGAGGCTATGAAGTCATAGATGACATCAAAGAAGAGCTTGAAAGACAATGCCCCAGCGTCGTTTCATGTGCTGATATTCTTGCTATGGCAGCTAGAGATGCTGTTTTCTTTGCTGGGGGGCCAGTGTATGACATACCCCAAGGAAGAAAGGATGGAACAAGGTCTAAAATTGAGGACACAATCAATCTGCCATTCCCCACCTTCAATGCCTCTCAGCTCATCACCTTGTTTGGCAAACATGGTTTTTCTGCCCAAGAGATGGTCGCTCTCTCTGGGGCTCATACACTAGGAGTGGCAAGGTGTGCATCTTTTAAAAACCGGTTGACCCAGGTGGATCCAATGTTGGATTCGGAGTTTGCAAAGACACTGTCTAAAACATGCAGTGGTGGGGACAATGCCGAGCAGCCCTTCGACGCCACGAGGAACAATTTCGATAACTTATACTACAATGCTGTGCAAAGGAAAAATGGTCTTCTTACGTCGGACCAAACACTGTATAGTAGCCCCAAAACCAAGAACATTGTGAATGCTTATGCACTGAACCAGGCCATGTTTTTCTTTGACTTCCAGCAGGCTATGGTGAAAATGAGTTTGCTTGATGTCAAAGATGACTCCAAAGGGGAAGTACGAGATAATTGTCGTAAAATCAACTGA 984 0.4502 MLYQSYSKFWKMEMTNLGRVFLILEMIMSGLRFGLADGLSMNYYLISCPLAELVVKDTVNRALQDDPTLAAGLVRMHFHDCFIEGCDGSVLIDSTKDNTAEKDSPANLSLRGYEVIDDIKEELERQCPSVVSCADILAMAARDAVFFAGGPVYDIPQGRKDGTRSKIEDTINLPFPTFNASQLITLFGKHGFSAQEMVALSGAHTLGVARCASFKNRLTQVDPMLDSEFAKTLSKTCSGGDNAEQPFDATRNNFDNLYYNAVQRKNGLLTSDQTLYSSPKTKNIVNAYALNQAMFFFDFQQAMVKMSLLDVKDDSKGEVRDNCRKIN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1339 327 ProSitePatterns Peroxidases active site signature. 70 81 IPR019794 GO:0004601
Glsi12g1339 327 SUPERFAMILY Heme-dependent peroxidases 38 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi12g1339 327 FunFam Peroxidase 42 179 - -
Glsi12g1339 327 Pfam Peroxidase 55 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1339 327 Gene3D Peroxidase, domain 2 174 306 - -
Glsi12g1339 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Glsi12g1339 327 Gene3D - 42 327 - -
Glsi12g1339 327 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1339 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1339 327 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1339 327 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1339 327 PRINTS Haem peroxidase superfamily signature 70 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1339 327 PANTHER - 20 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1339 327 CDD secretory_peroxidase 38 326 IPR033905 GO:0004601|GO:0042744
Glsi12g1339 327 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1339 327 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1339 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1339 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1339 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1339 327 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1339 327 PRINTS Plant peroxidase signature 48 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1339 327 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1339 327 PRINTS Plant peroxidase signature 72 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1339 327 FunFam Peroxidase 174 306 - -
Glsi12g1339 327 ProSiteProfiles Plant heme peroxidase family profile. 38 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1339 Glsi-ChrGlsi12 30797492 30798757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1339 11 327 Peroxidase AT4G33420 71.293 3.15e-166 466