Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1306 ATGGTTATTGTGGGCTATCTTCTTGCGGGTTCCCTTATTGGACCAGGGGGTTTGAATTTCATTAGTGAAATGGTACAGGTTGAGACTGTTGCACAATTTGGGATTGTGTTTCTTCTCTTTGCTTTGGGGCTGGAGCTTCGGCAAAGATCAGAACCTGTTTTGAGGATTTTACTTGTGCAGTTGAAAGCTGTGGGTCCTGTTGCTGTTCTAGGAGGGATGCTTCAAATTATAATATTTATGTTTCTGTCCGGCATTCTTGCCATGTTAGTCGAGGCAAAATTGTGTGAGGGTGTATTTGTTGGTTCCTTTCTGTCTATGACATCAACAGCAGTGTTTTTGGTGAAGCGGAATAGTAATAATGCTCTTCATGGTCAAGTTACAATTGGGACTCTTATTTTTCAGGACTGTGCAGTGGGTTTACTATTCGCTTTGCTCCCAGTTTTGGGTGGTAACAGTGGTCTTCTGCGAGGAATGGTTTCAATGGGAAAGCTATTACTAGTATTGTCCTTGTATCTCATTGCTTCGTCTATATTGTCCTGGTCATTTGTCCCCCTCTTTCTTAAACTGATGATGCAGCTCTCATCCCTGCAGACAAGTGAACTTTATCGGCCAGCTGCTGTGGCTTTCTGCTTATTATCAGCTTGGGTAGAAACAATTCGTAATCTATTTTGCAGCTTTCTTCCTCTCGAGTATTGGAATGCTTATACACGTACACTTTCTTTGGAACCATGTAGACATCTTGCTGGCATCTGTAATCCTTGTTCTACATCAGATATAAGCATCACAGTTCAAATGGATGTAGGGGAAGGGCATAGCATTACGGGTCCAGGGTGCTGTGATGGGCGCGACGGAGACAAAGATGGGTTTGTGTCGAGTGGGGCCACTTTCAGGCGTCACACCTGCCGGCCGTACGCTAGTGACGGCCAACTGATGGCGGATATGGCGCCGGCAGAATCCAGCCTCTGTGTTCTGAGTTATGAGGATCTGAGCAGTACCCTGCGGCCACTGCCAACACTCCTCTCAGCTGATACTGTTTTGATTACCCAGTAG 1050 0.4562 MVIVGYLLAGSLIGPGGLNFISEMVQVETVAQFGIVFLLFALGLELRQRSEPVLRILLVQLKAVGPVAVLGGMLQIIIFMFLSGILAMLVEAKLCEGVFVGSFLSMTSTAVFLVKRNSNNALHGQVTIGTLIFQDCAVGLLFALLPVLGGNSGLLRGMVSMGKLLLVLSLYLIASSILSWSFVPLFLKLMMQLSSLQTSELYRPAAVAFCLLSAWVETIRNLFCSFLPLEYWNAYTRTLSLEPCRHLAGICNPCSTSDISITVQMDVGEGHSITGPGCCDGRDGDKDGFVSSGATFRRHTCRPYASDGQLMADMAPAESSLCVLSYEDLSSTLRPLPTLLSADTVLITQ 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1306 349 Pfam Sodium/hydrogen exchanger family 2 216 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Glsi12g1306 349 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 2 217 IPR045158 GO:0015386|GO:0071805|GO:1902600
Glsi12g1306 349 Gene3D - 1 223 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1306 Glsi-ChrGlsi12 30590778 30598248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1306 2 215 Antiporters AT5G51710 72.811 3.64e-98 300