Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1301 ATGTTGCTGAAAAATTTTAACTTGGATCCCAAATATTTAACGGCAACCCTTGTAGCCATAGTTTTAGCAGTTTTTCTGCTAGAAAGACATGGCAGAAGTCTTCCTGTCAAGAAAGGAAAATACCACCAAGTTGCTGGCACTGTCTTCCACCAACTCTTCAATTTTCACAGGCTTCATGATTACATGGCCGACCTCGCCGGAAAGCACAAAACTTACAGGCTGCTTAGCTTAGGAAGAAATGAGGTTTACACCGTAGACCCCATTAATGTTGAATACATCCTCAAAACAAACTTTGCAAACTATGGGAAGGGTGAGTTCCAGCATACCATCTTGAAGGACCTTCTGGGTGATGGAATTTTTGCAGTGGATGGAGAGAAATGGAAACAACAGAGAAAGGTAGCAAGCCATCAATTCTCCACCGGGCCATTGAGAGATTTCAGCAGTTCAGTGTTCAAATCCAACGCAGTAAAACTTGCAGGGGTGGTGTATGAAGCTTCAATCTCAAATCAAATAATTGAAATCCAAGACCTGTTTTTCAAATCAACCTTAGACTCGGTATTTAAGATTGTCCTTGGTGTAGAACTAGACACCATGGGTGGAACATATGAAGGTGGCACCAGGTTCTCCAGTGCTTTTGATGATGCAAGTGCAATTACTTTACATCGCTATGTTGATATTTTCTGGAAGATCAAGCGGTTCATGCACATAGGATCAGAGGCCTTACTCGGGAAAAACATCAGAGAGGTGGATGACTTTGTGTATAAAGTCATTAGAAGTAAGATCGAGCAAGTCCAAAAGTCATCATATGAGCCTGTGAGAAAAGACCTTTTGTTAAGGTTTCTAGAAATGAAAAAGACAGATCCTAAGTACCTAAGAGACATTATTCTCAATTTTATCATCGCGGGCAAAGATACAACAGCAATCACTCTATCCTGGTTCCTTTACACGCTCTGCAAGCATCCTCATGTACAGGAAAAGATTGTGCATGAAATCAAAGAGGCAACGAAGTTGGAAAAGTTTTCAACCATTGAGGAAGTTGCAGATAGCATAACAGAAGAAGCACTTGAAAAAATGCAGTATCTAACTGCGGCTTTGACCGAGACCCTGAGAATCTACCCAGCAGTTCCATGGGATGGTAAGATTTGTTTTAAAGATGATACCTGGCCAGATGGCTTCAGTGTGAAGAAAGGGGATTTTGTGTCATACCTACCTTATGCCATGGGCAGGATGAAATCCATATGGGGTGATGATGCTGAGGAATTCAAGGCAGAAAGATGGCTAGACAGTAATGGAAAATTCCAGCAAGAAAGCCCTTTCAAATTCACAGCGTTTCAGGCAGGTCCAAGAGTATGTCTAGGAAAGGATTTCTCGTACAGACAGATGAAGATCTTCTCTGCTGTCCTTTTAGGCAGCCACAAATTCGAGCTTGCTGATCAAAACAAACCGGTACATTACAGAACAACTCTTACTCTACATATCGATAAGGGTCTGCACCTCTATTGTTACCGGAGATTGGGACAAAGTGATGCTGCGAAGTAG 1539 0.4191 MLLKNFNLDPKYLTATLVAIVLAVFLLERHGRSLPVKKGKYHQVAGTVFHQLFNFHRLHDYMADLAGKHKTYRLLSLGRNEVYTVDPINVEYILKTNFANYGKGEFQHTILKDLLGDGIFAVDGEKWKQQRKVASHQFSTGPLRDFSSSVFKSNAVKLAGVVYEASISNQIIEIQDLFFKSTLDSVFKIVLGVELDTMGGTYEGGTRFSSAFDDASAITLHRYVDIFWKIKRFMHIGSEALLGKNIREVDDFVYKVIRSKIEQVQKSSYEPVRKDLLLRFLEMKKTDPKYLRDIILNFIIAGKDTTAITLSWFLYTLCKHPHVQEKIVHEIKEATKLEKFSTIEEVADSITEEALEKMQYLTAALTETLRIYPAVPWDGKICFKDDTWPDGFSVKKGDFVSYLPYAMGRMKSIWGDDAEEFKAERWLDSNGKFQQESPFKFTAFQAGPRVCLGKDFSYRQMKIFSAVLLGSHKFELADQNKPVHYRTTLTLHIDKGLHLYCYRRLGQSDAAK 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1301 512 Gene3D Cytochrome P450 37 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1301 512 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1301 512 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1301 512 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1301 512 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1301 512 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1301 512 PANTHER CYTOCHROME P450 27 497 - -
Glsi12g1301 512 Pfam Cytochrome P450 51 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1301 512 CDD CYP86A 70 497 - -
Glsi12g1301 512 SUPERFAMILY Cytochrome P450 44 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1301 512 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1301 512 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1301 512 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1301 512 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1301 Glsi-ChrGlsi12 30559819 30562892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1301 14 504 Cytochrome P450 AT2G45510 51.509 2.69e-174 499