Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1280 ATGTTTGTTAACATGGCTCACTTCTATATAAACTGTTTAGACTACCATGAAGTTTTCATCATATCTTCTCTGTATTCTATATCTGTTTCAATATTTTCAGACCAAATGGCTCTTCTGCCTCCACAAAACATCTTTTTTCCAATAACCTTCCTTCTCCTCTTGACATTTCTTTCAGTTTCAGTGTCCAAAGCAGAGCTTGATGCACACTACTATGCCCAAACATGTCCTGAATTGGAGAAAATAGTTTCGCAAACGGTCCTCAATGCTTCTAAATATGACCCAAAAGTCCCAGCTCGTATCTTGAGGATGTTCTTCCATGACTGTTTCATAATGGGATGCGATGCATCAATACTACTGGACTCAACTTCTACAAACCAAGCAGAGAAAGATGGCCCTCCTAATATCTCTGTTAGATCATTCTATGTGATTGATGATGCTAAAGCCAAGCTTGAAAAGGCTTGCCCACGCACAGTTTCATGCGCTGATATAATTGCCATTGCAGCAAGAGATGTGGTAGCCATGAGTGGAGGTCCATATTGGGATGTTTTAAAAGGAAGGAAAGATGGAAGGGTGTCAAAAGCATCTGATACCGTCAACCTACCAGCTCCAACCTTGAATGTGAGCCAACTCATTCAGAGCTTTGCTAAAAGAAGCCTGGGAGTCAAAGATTTGGTTACTCTATCAGGTGGTCACACTCTAGGCTTCTCACATTGTTCTTCTTTTGAAGCTCGGCTTCGTAATTTTAGCTTAATGCATGAGATTGATCCTAGTATGAACACTGAGTTTGCACAAGACCTCGGAAAGAAATGCCCAAAATCAAATAGGGACAAGAATGCTGGACAGTTCTTGGACTCAACAGCTTCAGTATTTGATAATGACTATTACAAACGACTGATTGATGGAAAAGGTGTGTTTTTATCAGATCAGTCACTTGTTGGTGATTACAGGACCAGATGGATTGTTGAAGCATTTTCCAGAGATCAAAGTTTGTTCTTCAAAGAATTTGCAGCTTCAATGTTAAAACTTGGAAATGTAGGTGTGTCCGAAACTGGAGAAGTAAGACTTAATTGCCGGCTCTATGTTGTAAACATGGGGGATAAGCAAATTAAGAAGCCAGAGCATCATCATTCACTTCATCACTCCATGCTAGAAAGTGTTCTAGAAACTTCCAATGCTGCAAAGGAATCTCTGATTTACAGTTACGGAAGAAGTTTCAAAGGATTTGCTGCTAAACTATCTAATGAAGAAGTAGCAAGACTCTTAGCTGGTAGAAAGGTGATAGGAGAAAGCTACTATGTCCTGGCTGAGGGCCTTGCACGGGGAAATGACGGAACACAGAGAGCTATTATCAGCAATTATGCACCATGGGTACTAACTATGTCAGCTACCAATGTCGAGCACAGGTATATATCAGAACTGGTTCTTGGAAATGGACAAAAGTTCCAGGGTTATGCTCTGAACAACTTTGTTCTCCATGGGAAATCTTTCACACTGATTTGGGGAGGAGATCCTGCAAATTTTTCAGCCAATATTGTGTCTCTAACTTCAAGATATTGTTATCCTGGAGAATTGGATTCATATAAAGTTGTCCTTTGTGAAGACTGGACAGATGGTGCATGGCAGGGGGGCGTCGGTGCCATAATGCCTCAAAGATCTTTCGATTATTTTTCCGTTGCTTTCCCTCCTCCAGCAACGCTCATTACCATGGAGGAAATGGAACAAGTGTTAAATCACATCAGAACCACCGAGTATTTATCACTGAACCTATACTTCGAATTGGCATTACTTAAAAGAAAGAATCGAACAGAAGCTAACGATTATGATTACCTTGGCATAATCAGGAATCAAAAGCACCAGAATAGCAGAGCATGGAATCTCAACTACCCTTCTCTAACACTAGCCGTGGAAGATGGCCAAAAGATCCAGGGCCAGTTCTATAGGACAGTTACAAATGTTGGATCGGCAAACTCACCCCACCCTGCAAATATAGATGAGCCCCATCTTCTGGAGGCTACAGTGAAACCATCTGTTCTTTCTTTCTTTGCTTATAATGAAGAGAAATCCTTCATTGTGAAAGTCAGTGGACCACGGATATTAGAGGTGCCAATTATGTCAGGTTCCATCACATGGAAAGATGGAAGGCATGAAGTGAGAAGCCCCCTTGTAGTTTACATTGTTATGCCTTCATTTTTTCCTAGCAATCCCCTCCGAGTCCAAGAGATAAGCAACCAAGAAGCACCAGCTAATTGTCTGCATTATGAAGTTAATACCTCAAGCTGA 2280 0.4114 MFVNMAHFYINCLDYHEVFIISSLYSISVSIFSDQMALLPPQNIFFPITFLLLLTFLSVSVSKAELDAHYYAQTCPELEKIVSQTVLNASKYDPKVPARILRMFFHDCFIMGCDASILLDSTSTNQAEKDGPPNISVRSFYVIDDAKAKLEKACPRTVSCADIIAIAARDVVAMSGGPYWDVLKGRKDGRVSKASDTVNLPAPTLNVSQLIQSFAKRSLGVKDLVTLSGGHTLGFSHCSSFEARLRNFSLMHEIDPSMNTEFAQDLGKKCPKSNRDKNAGQFLDSTASVFDNDYYKRLIDGKGVFLSDQSLVGDYRTRWIVEAFSRDQSLFFKEFAASMLKLGNVGVSETGEVRLNCRLYVVNMGDKQIKKPEHHHSLHHSMLESVLETSNAAKESLIYSYGRSFKGFAAKLSNEEVARLLAGRKVIGESYYVLAEGLARGNDGTQRAIISNYAPWVLTMSATNVEHRYISELVLGNGQKFQGYALNNFVLHGKSFTLIWGGDPANFSANIVSLTSRYCYPGELDSYKVVLCEDWTDGAWQGGVGAIMPQRSFDYFSVAFPPPATLITMEEMEQVLNHIRTTEYLSLNLYFELALLKRKNRTEANDYDYLGIIRNQKHQNSRAWNLNYPSLTLAVEDGQKIQGQFYRTVTNVGSANSPHPANIDEPHLLEATVKPSVLSFFAYNEEKSFIVKVSGPRILEVPIMSGSITWKDGRHEVRSPLVVYIVMPSFFPSNPLRVQEISNQEAPANCLHYEVNTSS 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1280 759 FunFam Peroxidase 69 209 - -
Glsi12g1280 759 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 354 429 IPR037045 -
Glsi12g1280 759 Pfam Peroxidase 83 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1280 759 Pfam Peptidase inhibitor I9 360 426 IPR010259 -
Glsi12g1280 759 Gene3D - 605 726 - -
Glsi12g1280 759 Pfam Fibronectin type-III domain 625 723 IPR041469 -
Glsi12g1280 759 ProSiteProfiles Plant heme peroxidase family profile. 65 361 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1280 759 FunFam Peroxidase 201 342 - -
Glsi12g1280 759 SUPERFAMILY Heme-dependent peroxidases 66 359 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi12g1280 759 PRINTS Haem peroxidase superfamily signature 97 111 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1280 759 PRINTS Haem peroxidase superfamily signature 223 238 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1280 759 PRINTS Haem peroxidase superfamily signature 176 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1280 759 PRINTS Haem peroxidase superfamily signature 283 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1280 759 PRINTS Haem peroxidase superfamily signature 158 175 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1280 759 CDD secretory_peroxidase 65 358 IPR033905 GO:0004601|GO:0042744
Glsi12g1280 759 Gene3D - 70 353 - -
Glsi12g1280 759 CDD PA_subtilisin_like 473 582 - -
Glsi12g1280 759 PRINTS Plant peroxidase signature 281 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1280 759 PRINTS Plant peroxidase signature 297 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1280 759 PRINTS Plant peroxidase signature 75 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1280 759 PRINTS Plant peroxidase signature 138 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1280 759 PRINTS Plant peroxidase signature 157 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1280 759 PRINTS Plant peroxidase signature 176 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1280 759 PRINTS Plant peroxidase signature 99 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1280 759 PRINTS Plant peroxidase signature 222 234 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1280 759 PRINTS Plant peroxidase signature 337 350 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1280 759 ProSitePatterns Peroxidases proximal heme-ligand signature. 223 233 IPR019793 -
Glsi12g1280 759 Gene3D Peroxidase, domain 2 201 342 - -
Glsi12g1280 759 Gene3D - 467 592 - -
Glsi12g1280 759 PANTHER PEROXIDASE 25-RELATED 54 354 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1280 Glsi-ChrGlsi12 30390670 30396246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1280 42 359 Peroxidase AT5G51890 72.100 1.85e-168 486