Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1279 ATGGGTTATATGATTAAAATAATTTTAGAAGTGGAAGATGGACCCCAGCTCTTGGCTCTATGCTGGCGTCAACTTGGTCACGCTGAGTGGCTGGACTCGGGCGGTCGGGCCAGGAGATCTGGTCATGTGATTGCTGAGGTTGAGGCACGTGTTAGAAGGATTTTGTGGGGCCCCTCCTTTTATAAAGGTTTAGAGGGGGATAGACTTGGTCCCAAAGCACAACAAAAGCAGGTTCACTTCTATTTATATTGTTCAGTCTTCCTTGGATTTTTCATCGATCCCATATCCTTATTTTCCATCAGTTTCATTTTACACCAAATGGCTCTTGTACCATTAAAGAACTTGTTTTTTACTACCAATTTCCTCCTCTTTACACTGGTTTTAGTATCACAAGCAGTGCTTGATGCTAGCTACTATTCCCAAACATGTCCGCAATTAGAAAAAATAGTTTCAGAGACGGTTCTCAATGCTTATAAGTATGACCCAAAAGCCCCGGCTCGTATATTGAGGATGTTCTTTCATGACTGTTTCATTAGGGGATGTGATGCGTCAATACTGCTAGACTCTAGTCCCACAAATCAAGCAGAGAAAGATGGCCCTCCTAATGTCTCTGTTAGATCCTTCTATGTGATTGATGATGCTAAAGCCAAACTTGAAATGGCCTGCCCACGCACAGTTTCATGTGCTGATATTATTGCCATAGCAGCAAGAGATGTGGTAGCCATGACTGGAGGTCCATATTGGGATGTTTTAAAAGGAAGGAAAGATGGAAGGGTGTCAAAAGCATCTGATACCGTCAACCTACCAGCTCCAACCTTGAATGTGAGCCAACTCATTCAGAGCTTTGCTAAAAGAGGTCTGGGAGTCAAAGATTTGGTTACTCTATCAGGTGGTCACACTCTAGGCTTCTCACATTGTTCTTCCTTCGAAGCTCGGCTTCGTAATTTTAGTTCATTGCATGACATTGATCCTAGTTTGAACACTGAATTCGCACAAGACCTTAGAAAGAAATGCCCAAAACCAAGTAGGGACCACAATGCTGGACAGTCCTTGGACTCGACAACTTCAGTATTTGATAATGACTATTATAAACGAGTGGTTGCCGGGAAAGGTGTATTTTTATCGGACCAGTCACTTGTTGGTGATTACAGGACCAGATGGATTGTTGAAGCATTTGCCAATGATCAAAGTTTGTTCTTCAAAGAATTTGCAGCTTCAATGTTGAAACTTGGAAATGTAGGTGTGTCTGAAACTGGAGAAGTGAGATTTAATTGCCGGGTTGTGAATTGA 1290 0.4233 MGYMIKIILEVEDGPQLLALCWRQLGHAEWLDSGGRARRSGHVIAEVEARVRRILWGPSFYKGLEGDRLGPKAQQKQVHFYLYCSVFLGFFIDPISLFSISFILHQMALVPLKNLFFTTNFLLFTLVLVSQAVLDASYYSQTCPQLEKIVSETVLNAYKYDPKAPARILRMFFHDCFIRGCDASILLDSSPTNQAEKDGPPNVSVRSFYVIDDAKAKLEMACPRTVSCADIIAIAARDVVAMTGGPYWDVLKGRKDGRVSKASDTVNLPAPTLNVSQLIQSFAKRGLGVKDLVTLSGGHTLGFSHCSSFEARLRNFSSLHDIDPSLNTEFAQDLRKKCPKPSRDHNAGQSLDSTTSVFDNDYYKRVVAGKGVFLSDQSLVGDYRTRWIVEAFANDQSLFFKEFAASMLKLGNVGVSETGEVRFNCRVVN 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1279 429 Gene3D - 137 429 - -
Glsi12g1279 429 FunFam Peroxidase 137 277 - -
Glsi12g1279 429 PRINTS Plant peroxidase signature 365 382 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1279 429 PRINTS Plant peroxidase signature 206 219 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1279 429 PRINTS Plant peroxidase signature 405 418 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1279 429 PRINTS Plant peroxidase signature 167 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1279 429 PRINTS Plant peroxidase signature 225 235 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1279 429 PRINTS Plant peroxidase signature 290 302 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1279 429 PRINTS Plant peroxidase signature 143 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1279 429 PRINTS Plant peroxidase signature 349 364 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1279 429 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1279 429 CDD secretory_peroxidase 134 428 IPR033905 GO:0004601|GO:0042744
Glsi12g1279 429 PANTHER PEROXIDASE 25-RELATED 125 422 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1279 429 Gene3D Peroxidase, domain 2 269 410 - -
Glsi12g1279 429 Pfam Peroxidase 152 395 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1279 429 FunFam Peroxidase 269 410 - -
Glsi12g1279 429 SUPERFAMILY Heme-dependent peroxidases 134 429 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi12g1279 429 PRINTS Haem peroxidase superfamily signature 291 306 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1279 429 PRINTS Haem peroxidase superfamily signature 244 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1279 429 PRINTS Haem peroxidase superfamily signature 226 243 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1279 429 PRINTS Haem peroxidase superfamily signature 165 179 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1279 429 PRINTS Haem peroxidase superfamily signature 351 366 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1279 429 ProSiteProfiles Plant heme peroxidase family profile. 133 429 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1279 429 ProSitePatterns Peroxidases proximal heme-ligand signature. 291 301 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1279 Glsi-ChrGlsi12 30385550 30388506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1279 113 429 Peroxidase AT5G51890 72.013 1.03e-172 484