Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1278 ATGATGGAGCTGCCGGAGTCGAGTTTTCCAGAGCCAGTGCCGCCGTCACCGACTGTTCCCCTGAAAGAAGAACTCGCGGACACAGAGCAAAGCCTGCAAGAGTCTCTTTCCACGGGTGTTATTCAGTCGGAGGGAGAAACAATCAAGTGGTTGCTGGAGCACGCTGAACCGGCTATCATACAAGCCACCGGCACCGGAACCATCCCCGCCATCGCCGTTTCCGTTGGCGGCACTCTAAAGATTCCAACTTCGTCAACGGCGAGACCAAACGGAGAAGAAACCCCAAGAAAGCGAAGACGTGCATCGAACAGCGAGTTCATTGACGCGAACCATCAAATTTCAGTGCCTTCTGGGCTTGCTCCGACCAGTGGTAGCGGAGGTGGTAGTCCTGGTGTTGCTGGTGCGCAAGGAGGACAAGTTCCTTTTTGGTCAGTCAGTGGGCCAAATACCGCAGGTCCTTTCTTTATGTTCCCAAACACTGCAAATCAACCACAGTACTGGGCAATTCCTGTAACTGCAACCCAACTTTTGAACGTCCAAACCAGACCCATATCCAGCTTCGTTCCTGCTGTGCAACCAAGTGAGCCACCATCAGGCCAAACGCAGTCTTCAGACTCGAATTCAAATGGTGCTTCTGGATCCACAAACTCTTCATCGACTATGGCTCCAACTTGGAGCTCAGGAACAAGTTCTAGTGTTAGTGCTACAGCTGCTCCTTCCGGTTCTACAACCGCTCATCTGCTAAGAGATTTCTCTTTGGAAATTTATGACACGAAAGAGCTGCAATTCTTGGGTCATTCTGCAAGGGAAAAATCACCGAACTCCCAGTCTTGA 834 0.512 MMELPESSFPEPVPPSPTVPLKEELADTEQSLQESLSTGVIQSEGETIKWLLEHAEPAIIQATGTGTIPAIAVSVGGTLKIPTSSTARPNGEETPRKRRRASNSEFIDANHQISVPSGLAPTSGSGGGSPGVAGAQGGQVPFWSVSGPNTAGPFFMFPNTANQPQYWAIPVTATQLLNVQTRPISSFVPAVQPSEPPSGQTQSSDSNSNGASGSTNSSSTMAPTWSSGTSSSVSATAAPSGSTTAHLLRDFSLEIYDTKELQFLGHSAREKSPNSQS 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1278 277 Pfam TCP family transcription factor 43 87 IPR017887 -
Glsi12g1278 277 MobiDBLite consensus disorder prediction 106 124 - -
Glsi12g1278 277 MobiDBLite consensus disorder prediction 91 105 - -
Glsi12g1278 277 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 42 259 IPR005333 GO:0003700
Glsi12g1278 277 MobiDBLite consensus disorder prediction 1 39 - -
Glsi12g1278 277 MobiDBLite consensus disorder prediction 81 135 - -
Glsi12g1278 277 MobiDBLite consensus disorder prediction 188 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1278 Glsi-ChrGlsi12 30384217 30385212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1278 42 264 TCP Transcription Factor Family AT5G51910 42.241 5.59e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Glsi12g1278 TCP 3.7e-05 No_clan