Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1253 ATGAAATCCATGATAGACGGCCAGCTGAGAACCAATCAAATATCGCCACGTCATCTCAGAGTTCGAACCGCGTCCGCGAAATCCAACACCGACTACGTTCCCCTATCATCCTCCCGACGCGTGTCCCGCCGGATACTGGACAGAACCGGTAATATAGGGCTAGAGACCGGCACAGTCGGTCATTGCCCGTACTGCTATTCCTGCCAGACGGTTGTCCAAGATATAAAATTTAGGGTTTTGTGGGTCTGGTTGGTAGATAGTGATTTTACTACCTTAAAAGGACAATACGTCATGGTTCAATTTGTGGGCCTGGCTCTGGAGAGCTACTTAGACTCCAGTCACCAAGGGGCGGTGCCCCCCATGGCACCCTCTCGGGTGGCTGGAGGGTTAACCCAATCATCTTCAAATTCTGGAATATTCTTTCAAGGGGATGGGCAGTCACAGAATGTAGTTAGCTCTCACTTAAGCTCCTCTTTCGGTAACTCATCTAATTCGATTCCTGGAACCGGGCTTTCAAATCTGGGTCCGGTTTCTGGGGACATGAACAATGCAGTTTTAAACAGTGTGGCAAATTCAGGACCAAGTGTTGGAGCAAGTTCTTTAGTCACAGATGCAAACTCTGCACTTTCAGGAGGCCCTCATTTGCAGAGAAGTGCAAGCATTAACACAGACTCTTACTTACGTTTACCTGCATCTCCCATGTCATTCTCGTCAAATAATATTAGTATTTCGGGTTCATCGGTTATGGATGGTTCTTCTGTAGTACAGCAGAGCTCCCATCAAGACCAGAGTGTTCAACAATTGCAGCAGAACCAGCAGACGCCACAGGGTGCTTCAAGTTCTACGTCTTTGGCTGCATCTCAAACTGGCCCATCCCCACTCCCAATGGGTGCACGGGTACCTGGTTCTTTCATTCAGGATCCAAATAATTTATCCCAGCTACATAAGAAACCTCGGCTGGATATTAAGCAGGAAGATATGCTGCAACAGCAAGTAATGCAACAGATTCTTCAGAGACAGGACTCCATGCAGTTCCAGGGTCGTAATCCACAACTACAAGCTTTGCTTCAGCAGCAGAGACTTAGACAACAACAACAGCAAATCCTTCAATCGATGCCACAGTTACAACGAGCCCACTTACAACAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAACAACAACAGCTGCAATTGAGGCAGCAATTACAGCAACAAGTAATGCAACCCATGTCTTCCTTGAAACGCCCGTATGAGAGTGGTGTATGTGCCCGTCGATTAATGCAATACCTGTATCACCAACGGCAGCGGCCAAATGATAATAGTATTGCCTATTGGAGGAAATTTGTGGCTGAATATTATTCGCCTCGTGCAAAGAAACGGTGGTGCTTGTCATTATATGATAATGTTGGGCATCATGCACTTGGTGTTTTTCCCCAAGCAGCTATGGATGCATGGCAGTGCGACATATGTCGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTTTGAAGTGCTCCCTAGGCTTAATGAAATCAAATTTGGCAGTGGAGTGATAGATGAACTTTTGTTTTTGGACTTGCCACGCGAATGTAGATTTCCTTCTGGAGTAATGACGTTAGAATATGGAAAAGCTGTTCAAGAGAGTGTGTATGAGCAGCTTCGTGTTATTCGTGAGGGTCAACTTCGCATCATATTCACACAAGACTTGAAGATATTATCTTGGGAATTTTGTGCAAGACGCCATGAAGAACTTCTTCCTAGAAGGTTGGTTGCACCACAGGTCAACCAGTTGGTTCAGGTAGCACAAAAGTGCCAGAGTACAATTGCTGAAGGTGGATCTGATGGGATTTCACAGCAGGACTTGCAGACAAATAGCAATATGGTATTGACAGCTGGGCGTCAGCTTGCAAAGATTTTGGAGTTACAATCGCTAAATGACCTAGGTTTCTCCAAGAGATATGTGAGATGTTTGCAGATATCGGAGGTTGTAAATAGCATGAAGGATCTGATAGATTTCTGCCAAGAGCACAAAATTGGGGCAATTGAGGGCTTGAAAAATTATCCTCGACATGCCAGTGCAGCCAAGCTCCAGATGCAAAAGATGCAGGAGATGGAACAACTAGCAAGTGTTCAAGGTCTGCCAACTGACCGAAATACACTTAATAAGCTAATGGCAATGCATCCTGGGTTGAACAACCAAATCAACAATAATCATAATATAGTTAACCGCGGTGCTTTAAGTGGGTCCGCACAAGCTGCTATGGCACTGTCTAATTACCAGAATCTTCTTGTGAGGCAAAACTCGATGAATTCAAATTCTAATTCACTCCAGCGAGAAGCATCGTCTTCCTTCAATAATTCAACTCAGAGTCCATCGCCAACCTTGCAAGGTTCTGCTGCTGCTTTAATTCCAGGCTCCATGCAGAATTTACCTGTTAGTGGTTTCTCAAGTCCCCATCTATCTCAACAGCAGCAGCAACACCAACACCAACTGCAACAACTTCAACAGCGCTCGTTAAGTGCAAATAACATGCTTCAACAAAGCCATTCACAGGGCTCCCAAGGAAATGAGGCTCTGCACCAGCAGATGTTCCAGCAAATGTTGCAAGAGATGTCAAATAGCAGTGGGGGAGGAATGCAACCCCAGCCCCTTGCTGGACCCAATGTAAATGGGAGTATGGCAAAGATTGGGTTGGGTTTTGGAGGCAACACCCCACCAGTAACTGGAGTTAGTGCTAATATTTCAGGAAGTAATGGACCTGCCCCTAGCAGGAGCAACAGTTTCAAAGCTGCTTCAAACAGTGATTCTTCCGCAGCTGCTGGGAACAATGGATTCAACCAGAGAACTTCTGATCTGCCACAGAATCTCCATTTACAGGACGATGTGGTTCAGGATATTGCACGTGAGTTCCCGGATAATGGCTTCTTTAACAGTGATCTAGATGAGAACATGGGTTATGGCTGGAAGGCATGA 2976 0.4587 MKSMIDGQLRTNQISPRHLRVRTASAKSNTDYVPLSSSRRVSRRILDRTGNIGLETGTVGHCPYCYSCQTVVQDIKFRVLWVWLVDSDFTTLKGQYVMVQFVGLALESYLDSSHQGAVPPMAPSRVAGGLTQSSSNSGIFFQGDGQSQNVVSSHLSSSFGNSSNSIPGTGLSNLGPVSGDMNNAVLNSVANSGPSVGASSLVTDANSALSGGPHLQRSASINTDSYLRLPASPMSFSSNNISISGSSVMDGSSVVQQSSHQDQSVQQLQQNQQTPQGASSSTSLAASQTGPSPLPMGARVPGSFIQDPNNLSQLHKKPRLDIKQEDMLQQQVMQQILQRQDSMQFQGRNPQLQALLQQQRLRQQQQQILQSMPQLQRAHLQQQQQQQQQQQQQQQQLQLRQQLQQQVMQPMSSLKRPYESGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICRSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPRECRFPSGVMTLEYGKAVQESVYEQLRVIREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAEGGSDGISQQDLQTNSNMVLTAGRQLAKILELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDFCQEHKIGAIEGLKNYPRHASAAKLQMQKMQEMEQLASVQGLPTDRNTLNKLMAMHPGLNNQINNNHNIVNRGALSGSAQAAMALSNYQNLLVRQNSMNSNSNSLQREASSSFNNSTQSPSPTLQGSAAALIPGSMQNLPVSGFSSPHLSQQQQQHQHQLQQLQQRSLSANNMLQQSHSQGSQGNEALHQQMFQQMLQEMSNSSGGGMQPQPLAGPNVNGSMAKIGLGFGGNTPPVTGVSANISGSNGPAPSRSNSFKAASNSDSSAAAGNNGFNQRTSDLPQNLHLQDDVVQDIAREFPDNGFFNSDLDENMGYGWKA 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1253 991 Pfam LIM-domain binding protein 426 685 IPR029005 -
Glsi12g1253 991 MobiDBLite consensus disorder prediction 913 956 - -
Glsi12g1253 991 PANTHER LIM DOMAIN-BINDING PROTEIN 161 977 IPR029005 -
Glsi12g1253 991 Coils Coil 375 406 - -
Glsi12g1253 991 MobiDBLite consensus disorder prediction 247 290 - -
Glsi12g1253 991 MobiDBLite consensus disorder prediction 771 837 - -
Glsi12g1253 991 MobiDBLite consensus disorder prediction 247 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1253 Glsi-ChrGlsi12 30180538 30189415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1253 414 692 C2H2 Transcription Factor Family AT1G43850 59.498 5.89e-109 357