Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1183 ATGGAGTTTTTAGGGCTGGCTGGGGCTCTCGGGTTAATGGCAATTTTAGCTCTGATATTTTCACTTTTGAAACTTGCTTTTTCTTGGTGGGTTCGGCCTATCCTAACATATGAAAAGCTTAAGAGATGTGGGTTTGGAGGGCCAACCCCAAATTTTCCACTTGGAAATATCAAAGACATGAAAAATAAGAAGAATATCATCGATTCTTCACTTGGGTCCTCCAACCTCCCCCATGATATTCACTCCACCGTTTTTCCCTACTTTTCTAGGTGGCAGAATTCTCACGGGAAGGTGTTCGTGTACTGGCTAGGCACAGAGCCATTTTTGTACATTGCAGATCCAGAGTTCTTGAAGAAAATGTCGACCGAGGTCTTGGCTAAGAGATGGGGAAAACCCGATGTGTTTCGAAATGACAGAGATCCAATGTTTGGGAATGGTTTGATTATGGTAGAGGGCAACGATTGGGTTCGTCACAGACACATTATTGCCCCAGCATTCTCTTCCATTAACTTGAAGGGCATGACAAGCACGATGGTGGAGTCCACAAAGAGAATGATAGAAAGGTGGGCTACCCAGATAAACTCTGGCAACCCCGAAATCGACGTAGAGAAGGAGGTCATAGAAACGGCCGGAGAGATCATATCAAGGACAAGCTTCGGCATGAGAGATGAAAATGGGAGGGAAGTGGTTCAAAAACTAAGAGCCTTGCAAAAGACTCTCTTTAAGACCACTCGGTATGTCGGGGTTCCATTCGGTAAGTGTCTCAACATCAAGAAAACCCTAGAAGCCAAGAAGCTTGGGAAAGAGATAGACAGGCTCCTGTCGACCGCCATAGCAGCTCGGAAAAGGACAATGAAGAGGCATGAATCTGAGAAAGATTTGTTAGGGATGATGCTGCAGGAAAATCATGAGGTAGATGGCCAAATAGGGAAGACATTAACTACGCGAGAACTGATTGATGAGTGCAAGACCTTCTTCTTTGGTGGGCATGAGACAACGGCACTGGCTATCACATGGACTTTGCTGCTTCTAGCTACACATGAAGATTGGCAAATCCAGTTGAGAGATGAAATAAGAGAAGTGGTGGGTGATGAAGAACTTGATATCAAAGCGCTTGCTGGGCTGAAAAAGATGAGGTGGGTGCTGAATGAAATTCTCAGACTATACCCTCCGGCACCAAATGTGCAAAGGCAAGCAAGAGAAGACATTCGAGTTGATGATTTAACAGTGCCTAATGGAACCAACATGTGGATCGACGTGGTAGCGATGCACCATGACCCTGCTTTGTGGGGTAAAGATGTGAATGAGTTCAGACCAGAGAGGTTCATGGATGATGTGAATGGTGGGTGCAGCCACAAGATGGGTTACTTGCCTTTTGGGTTCGGAGGGAGAAGCTGTGTCGGTAGAAACTTGACCTTTATGGAGTACAAGATTGTATTATCCCTACTTCTCTCTAGGTTTAGTTTTAAACTTTCCCCTAGTTACCTTCATTCACCCTCTATCATGCTCTCCCTCAGGCCACTTCATGGACTTCCTCTCATAGTACAGCCCCTTTAA 1557 0.4534 MEFLGLAGALGLMAILALIFSLLKLAFSWWVRPILTYEKLKRCGFGGPTPNFPLGNIKDMKNKKNIIDSSLGSSNLPHDIHSTVFPYFSRWQNSHGKVFVYWLGTEPFLYIADPEFLKKMSTEVLAKRWGKPDVFRNDRDPMFGNGLIMVEGNDWVRHRHIIAPAFSSINLKGMTSTMVESTKRMIERWATQINSGNPEIDVEKEVIETAGEIISRTSFGMRDENGREVVQKLRALQKTLFKTTRYVGVPFGKCLNIKKTLEAKKLGKEIDRLLSTAIAARKRTMKRHESEKDLLGMMLQENHEVDGQIGKTLTTRELIDECKTFFFGGHETTALAITWTLLLLATHEDWQIQLRDEIREVVGDEELDIKALAGLKKMRWVLNEILRLYPPAPNVQRQAREDIRVDDLTVPNGTNMWIDVVAMHHDPALWGKDVNEFRPERFMDDVNGGCSHKMGYLPFGFGGRSCVGRNLTFMEYKIVLSLLLSRFSFKLSPSYLHSPSIMLSLRPLHGLPLIVQPL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1183 518 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1183 518 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1183 518 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1183 518 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1183 518 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1183 518 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1183 518 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1183 518 SUPERFAMILY Cytochrome P450 75 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1183 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 24 505 - -
Glsi12g1183 518 Gene3D Cytochrome P450 33 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1183 518 Pfam Cytochrome P450 84 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1183 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Glsi12g1183 518 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1183 518 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1183 518 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1183 518 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1183 Glsi-ChrGlsi12 29625520 29629180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1183 12 518 Cytochrome P450 AT5G52400 59.295 0.0 646