Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1182 ATGGAGTTTTTAAGGCTGCCTGTAGCTCTTGTCTTCATGGCTATCTTAGCTATGATCTTTTTACTTTTGAAAATTGCATTTTCTTGGTGGGTATCGCCTATCCTAACACATCAGAAGCTCAAGAGATGTGGATTTGGAGGGCCAACCCCAAGTTTTCCACTTGGAAACATTAAAGAGATGAGAAAGGAGAAAAATTGCATTGATTCTTCACTTTGTTCCTCCAATCCCACCCATGACATACACCCTACCGTTTTTCCTTACTTTTCTCGATGGCAGAATTCTCACGAAGTATTGGCCAAGAGATGTGGAAAGCCCAGTGTGTTTAGAAATGACAGAGATCCCATGTTTGGCAGTGGTTTAGTTATGGTCGAAGGCAACGATTGGGTTCGCCACCGCCACATTGTTGCCCCTGCATTCTCCCCACTTAACTTGAAGGCAATGGCAAGCATGATGGTGGAGTCCACAAACCAAATGATAGAAAGGTGGGGTTCCCAAATAAACTCGGGCAAGCCTGAAATAGACGTAGAGAGGGAGATTACCGCAACGGCAGGAGAAATCATAGCAAGAACAAGCTTCGGCATGAGAGTTGAAAATGCCAGGGTGGTGTTTGAAAAACTAAGAGCCCTACAAATGACCCTTTTCAAGACCAACAGATACGTGGGGGTCCCCTTTGGCAATTATCTCAACGTCGAGAAAACCCTAGAGGCCAGGAAACTTGGTAAAGAAATCGACACTTTCTTGTTGTCCGTCATAGAAGCTCGGAAGAAGTCGAACGAAAGACAATCTCAGCAAGATTTGTTGGGCCAGCTGCTGAGAGAAAATAACCAGGTAGGTGGTCGGTTAGGGAAGACATTAACAATGCGAGAACTTGTTGATGAGTGCAAGACCTTCTTCTTTGGCGGCCATGAGACCACTGCACTGTCTATCACTTGGACACTGCTGCTTCTGGCTACGCATGAAGATTGGCAAAATCAACTGAGAGATGAGATAAGAGAAGTAGTGGGAGATATTAATGAGCTTGATGTCAATGTGCTTGCTGGTCTAAGGAAGATGAAGTGGGTGATGAATGAAGTTCTTAGACTGTACCCACCTTCACCAAATGTGCAAAGGCAAGCAAGAGAAGACATTAAAGTTGATAATTTGACGGTACCAAATGGAACCAACATGTGGATTGACGTGGTGGCTATGCACCACGACCCAGCATTGTGGGGAAAGGATGTGAATGAGTTCAGACCAGAGAGGTTCAAGGACGATGTGAATGGTGGTTGCAGCCACAAAATGGGGTACTTGCCTTTTGGGTTCGGAGGGAGAAGCTGTGTTGGTAGAAACTTGGCCTTTATGGAGTATAAGATAGTGTTAACCCTACTTCTCTCTAAGTTTAGGTTTAAACTTTCCCCAGGTTACAATCATTCACCTTCTATCATGCTCTCTCTAAGGCCCGCTGATGGACTTCCTCTCATAGTTGAGCCCCTTTAA 1476 0.4492 MEFLRLPVALVFMAILAMIFLLLKIAFSWWVSPILTHQKLKRCGFGGPTPSFPLGNIKEMRKEKNCIDSSLCSSNPTHDIHPTVFPYFSRWQNSHEVLAKRCGKPSVFRNDRDPMFGSGLVMVEGNDWVRHRHIVAPAFSPLNLKAMASMMVESTNQMIERWGSQINSGKPEIDVEREITATAGEIIARTSFGMRVENARVVFEKLRALQMTLFKTNRYVGVPFGNYLNVEKTLEARKLGKEIDTFLLSVIEARKKSNERQSQQDLLGQLLRENNQVGGRLGKTLTMRELVDECKTFFFGGHETTALSITWTLLLLATHEDWQNQLRDEIREVVGDINELDVNVLAGLRKMKWVMNEVLRLYPPSPNVQRQAREDIKVDNLTVPNGTNMWIDVVAMHHDPALWGKDVNEFRPERFKDDVNGGCSHKMGYLPFGFGGRSCVGRNLAFMEYKIVLTLLLSKFRFKLSPGYNHSPSIMLSLRPADGLPLIVEPL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1182 491 Pfam Cytochrome P450 99 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1182 491 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1182 491 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1182 491 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1182 491 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1182 491 Gene3D Cytochrome P450 31 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1182 491 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1182 491 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1182 491 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1182 491 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1182 491 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1182 491 PANTHER CYTOCHROME P450 FAMILY MEMBER 23 476 - -
Glsi12g1182 491 SUPERFAMILY Cytochrome P450 84 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1182 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1182 Glsi-ChrGlsi12 29609307 29612310 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1182 1 491 Cytochrome P450 AT5G52400 54.753 0.0 585