Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1175 ATGTCGAAGTCCGTTTGGTTGGGTTTTGCAGTGCTTCGAAGTTTAGATTATGATGACCCACATGCATTTCCGCTAACTTTTCGAGCTTCCGTGGGCGCTGCTTCGTCTTCTTCGGCCTCAAATCTCCTGTCTCTTATTGTTTATGTTTTCCTCCTTGTAGTTTTCATGTTGCAATGGTGCTTCACGGGAATGGCTCCAAAACAGCCGAGTACGGGTTTGTTTGTTGGATTGAACAAGGGTCACGTTGTGACCAAGAAGGAATTGGCTCCACGCCCTTCAGATCGCAAAGGGAAAACCAGTAAGAGGGTACACTTTGTAAGGAATCTAATTCGCGAAGTTGCTGGCTTTGCTCCATATGAAAAGAGGATTACAGAGCTTTTGAAGGTTGGCAAGGACAAGAGGGCGTTGAAAGTTGCAAAGAGAAAGTTGGGTACACACAAGAGGGCCAAGAGGAAGCGTGAAGAGATGTCCAACGTTCTCCGAAAGATGAGGGCCGGTGGAGCTGGGGACAAGAAGAAGTGA 522 0.4732 MSKSVWLGFAVLRSLDYDDPHAFPLTFRASVGAASSSSASNLLSLIVYVFLLVVFMLQWCFTGMAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSNVLRKMRAGGAGDKKK 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1175 173 ProSitePatterns Ribosomal protein L36e signature. 118 128 IPR000509 GO:0003735|GO:0005840|GO:0006412
Glsi12g1175 173 MobiDBLite consensus disorder prediction 139 173 - -
Glsi12g1175 173 Pfam Ribosomal protein L36e 71 164 IPR000509 GO:0003735|GO:0005840|GO:0006412
Glsi12g1175 173 FunFam 60S ribosomal protein L36 64 169 - -
Glsi12g1175 173 PANTHER 60S RIBOSOMAL PROTEIN L36 57 171 IPR000509 GO:0003735|GO:0005840|GO:0006412
Glsi12g1175 173 MobiDBLite consensus disorder prediction 150 173 - -
Glsi12g1175 173 Gene3D 60S ribosomal protein L36 63 170 IPR038097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1175 Glsi-ChrGlsi12 29560436 29563901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1175 64 173 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 82.143 1.17e-58 177