Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1151 ATGTCGACGCCGGGATACCCCAGCGGTGGAGCATCGGAATTTTTCGGTCGTTCCGGTCGATCGATGGCGGCGAACACCATTAACAACCCCGTCACCACCGCCAGCAACAACCTTCACCCTTCTCATCCTCTGCATCGAACCCAGCCGAACCTCCCTGCAATTTTTCTCGATCCTTCGCAGATCGCACGGCAAAATCCTAGCCTCATCGGTAAGCGCACCCTTGCAGAATTTCAAAACCAGCGAAACCAAAACCATGTTTTTTCAAACCTTCTACTTCGCTCTGTGAAGCCCAGAACTTTTCAGTATGGCTCTCCTATGTCTCCTGTGACACCCATGGATTTCTCCATGTCCCCTGAATTGTCAAACTCCTCCGCTTTTACGTCCCAGCGTTTTAGTATGCCTCTTCTTCAACAACTCCGCCCCCAACCCATTAATCTCCCAAACGGGTCTCTACCCATGAGTAATTCGCTGTTACCAAACGCTGGTATTCCGTACCAAAGTTCTAATTTGGCTCAGGTTCAGAACAAAGTTCCAACTCAGGAAACCGAGAAGAAAGTTATGGACCATCGGCTTCAGGAGTTGGAAAAACAGCTTTTGGAGGATAATGATGAGGAAGAAGGCGATGCAGTCTCTGTGATTACCAGTAGCGAGTGGTCAGAGACTATCCAGAACTTGATCAGCCCTGGGCATAAACCCATTTCGTCCTCGCCCACTTCATCTACAACGTCATCGACCTCATCTTCTTCCTCTGTAGCGTCCCCTGCTTCCAGCTGTTCGAAGCAGTCGTTAATGGAGGCTGCATCTGCAATTTCCGAAGGGAAATCGGAGTCTGCGTTGGGGATCCTTAACCGTTTATCCCAGGTTTCAAACCCGACTGGGAATTCGGATCAAAGATTGACGGATTACATGGTTTCTGCACTGAAATCGCGCATGAACCCACGCGAAAACCCACCTCCAGTAGCAGAGCTCTTCAGCAGAGAACACACCGAGTCAACTCAGTTGCTCTTTGAAAACTCACCCTGCTTCAATTTCGGGTTCATGGCGGCCAATCTCGCAATCCTTGAAGCCACATTAGAGGACAAAACAGAGAACGGCAACAAGATCCGGGTGGTCGATTTTGACATAGGACAGGGGAATCAATACGTGCATCTTCTGCACGCGCTCTCTTTGCGTCAGAATGGGAAGCCAGCCGTGGTGAAGATCACGGCTGTTGCAGAGAATGGAGATGAGGAGAGGTTGAAGACAGTAGGGGACATGCTGAGTCGAAACGCGGACAAATTCGGGGTCGGGTTCGAATACAAAGTGGTAACTAATAAGCTCGGCGAGCTGACTCGCGAGTCGCTGGGTTGCGAACCGGACGAGCCGTTGGCGGTGAACTTCGCCTTCAATCTGTACCGAATGCCGGACGAGAGCGTGTCTACAGAGAACCCACGAGACGAGCTCCTCCGGCGCGTGAAGCGTTTGGCGCCGCGCGTGGTAACGCTTGTGGAAGAAGAAATGAACACCAATACGGCGCCGTTTATAGCTCGCGTGGCCGACACATGCTCGTATTATGGTTCTCTTTTTGATTCAATAGAGTGCACAATGCCAAGGGAGAGCTCGATCCGAGTGAAGGTGGAGGTAGGACTGAGTCGAAAGATGGGGAACTCGGTGGCCTGCGAAGGGAGGGATCGCGTGGAAAGATGTGAGGTGTTTGGGAAGTGGCGGGCCCGCATGAGCATGGCGGGGTTCCAGTTAAAACCAATGAGTCAGAGCATCGCCGAGTCAATCAAAGCGCGACTCAACCCGGGATTCACCGTGAAAGAAGAAAATGGTGGGATTTGCTTTGGCTGGAAGGGTCGAACACTCACCGTCGCATCTGCTTGGCGTTAA 1872 0.5176 MSTPGYPSGGASEFFGRSGRSMAANTINNPVTTASNNLHPSHPLHRTQPNLPAIFLDPSQIARQNPSLIGKRTLAEFQNQRNQNHVFSNLLLRSVKPRTFQYGSPMSPVTPMDFSMSPELSNSSAFTSQRFSMPLLQQLRPQPINLPNGSLPMSNSLLPNAGIPYQSSNLAQVQNKVPTQETEKKVMDHRLQELEKQLLEDNDEEEGDAVSVITSSEWSETIQNLISPGHKPISSSPTSSTTSSTSSSSSVASPASSCSKQSLMEAASAISEGKSESALGILNRLSQVSNPTGNSDQRLTDYMVSALKSRMNPRENPPPVAELFSREHTESTQLLFENSPCFNFGFMAANLAILEATLEDKTENGNKIRVVDFDIGQGNQYVHLLHALSLRQNGKPAVVKITAVAENGDEERLKTVGDMLSRNADKFGVGFEYKVVTNKLGELTRESLGCEPDEPLAVNFAFNLYRMPDESVSTENPRDELLRRVKRLAPRVVTLVEEEMNTNTAPFIARVADTCSYYGSLFDSIECTMPRESSIRVKVEVGLSRKMGNSVACEGRDRVERCEVFGKWRARMSMAGFQLKPMSQSIAESIKARLNPGFTVKEENGGICFGWKGRTLTVASAWR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1151 623 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 235 616 IPR005202 -
Glsi12g1151 623 MobiDBLite consensus disorder prediction 226 258 - -
Glsi12g1151 623 Coils Coil 184 204 - -
Glsi12g1151 623 Pfam GRAS domain family 260 623 IPR005202 -
Glsi12g1151 623 ProSiteProfiles GRAS family profile. 250 623 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1151 Glsi-ChrGlsi12 29410491 29412362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1151 28 623 GRAS Transcription Factor Family AT5G52510 49.765 1.03e-169 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi12g1151 GRAS 7.7e-105 CL0063