Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1137 ATGGTATCTAAAAACCCGAACCCGCCCGAGGGCTTCTACTTGGATCCCAGTGGCATGGCGCTACCTGGACTGGGTCCTTTTGTCTCAGTCACCACTCCCGCCACCACCACCACGACGGCTTCGAACACGAATTCCTCGGAGGACCCTGCAAAGAAGATCCGTAAACCATACACTATTACCAAGTCTAGGGAGAACTGGACTGAACCAGAGCATGACAAATTCCTCGAAGCCCTCCAACTCTTTGACCGTGACTGGAAAAAGATTGAAGCTTTCATTGGATCTAAGACAGTTATACAGGTGCTACTGTTGATGAGAAACTTGTCTATCAATTTAACTAGCCCAGATTTTGAGGATCATAGAAGGGTGATTTCGTCCTATGAAGCAGAATTGGAGACAAGTAACTACATAAATGCCGATAGACTCATGCACGATGAGCAATTGAGCTTCTGTGTGCAAGAAACCATCTGGTGCATAAAGAGATCTGATGTCACTCCCTTTTGGGATCCACAGAATGAGCGAAGATACGGTTTGTCTGGATCTGTCATCTGCTGGAACATAGGAAGACTAATATCATGA 576 0.4618 MVSKNPNPPEGFYLDPSGMALPGLGPFVSVTTPATTTTTASNTNSSEDPAKKIRKPYTITKSRENWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQVLLLMRNLSINLTSPDFEDHRRVISSYEAELETSNYINADRLMHDEQLSFCVQETIWCIKRSDVTPFWDPQNERRYGLSGSVICWNIGRLIS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1137 191 MobiDBLite consensus disorder prediction 32 55 - -
Glsi12g1137 191 Pfam Myb-like DNA-binding domain 63 100 IPR001005 -
Glsi12g1137 191 NCBIfam myb-like DNA-binding domain, SHAQKYF class 61 100 IPR006447 GO:0003677
Glsi12g1137 191 ProSiteProfiles SANT domain profile. 61 102 IPR017884 -
Glsi12g1137 191 PANTHER SWI/SNF COMPLEX-RELATED 34 101 - -
Glsi12g1137 191 Gene3D - 65 107 - -
Glsi12g1137 191 SMART sant 62 110 IPR001005 -
Glsi12g1137 191 MobiDBLite consensus disorder prediction 32 47 - -
Glsi12g1137 191 CDD SANT 65 100 IPR001005 -
Glsi12g1137 191 SUPERFAMILY Homeodomain-like 51 102 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1137 Glsi-ChrGlsi12 29309880 29316281 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi12g1137 Myb_DNA-binding 3.6e-06 CL0123