Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1086 ATGATGGGCTTAGAAATTCACATTGGGTCTGAGGCTATGAAGACCAACTTTAGGGCTCACTTGACTTCCGATCTTTCCTGGGAACGCTTAGCGCAAATGCAATTCGTTCTCAAGTCCTCTGCGTCTCTGGCTCCCATCGCGCTTACCGGGGAGCCAGCTCAAGCCAACAATGGCGAACTACCCAGTGGTAGAAGTACTATCAAAGTTCAAAAGTGCCCATCTAAATCCTACACTGCAATACAAGCTGTCATAGTCGAAGTTCAGCAGTCTTCTGATTTGGACTCAACTCTTGCAAGGTTTTTTACCGCTAAGCTTCAAGAGTTCCTTGGGAGGAAAGAACTTGATAGACATCTTGATGCTGATGAAGCTATAGTTCTTGGTGCAGCTCTCCATGCCGCAAATTTAAGTGATGAAATCAAATTGAACCGTAAGCTTGGAATGGTTGATGGTTCAATGTATGGATTTGTGGTTGAGTTGGATGGTCCTGATCTTTTGAAAAATGAAAGCTCTAAGCAGCTACTTGTACCAACAATGAAAAAACTACCAAGCAAGGTGTTTAGATCCATTAAGCATAACAAAGATTTTGATGTTTCACTAGCTTATGAGAGTGAAAATCTATTGCCACCTGGTGTTATCTCTACCGAAGTTGTTCGATATCAAATATCTGGTTTGACAGATGTTGGTGAGAAGATGGTGGGATCTGGAATGCCTTTATCAAAAGAGTTTCTTGCTGAAGCTAAAGGCAAATTAGAGGCGTTGAACAAAAAAGATGCAGAAAGAAGAAGAACAGCAGAATTAAAAAATAATTTGGAAGGGTATATATATACAACTAAGGAAAAGATTGAAACTTATGAAGATTGTGCAAAAGTTTCTACCAGTGATGAGCGCCAATCCTTTGTTGAGAAGCTTGATCAGGTGCAAGATTGGTTGTATACAGATGGTGAAGATGCCAATGCTACAGAGTTTCAAGAGCATCTAGATATGTTAAAAGCAGTAGGTGATCCAATTTTCTTCAGGTTGAAGGAGCTCATAGCTCGACTAGTGGCAGCTGAGCATGCTCGTAAATAG 1068 0.4092 MMGLEIHIGSEAMKTNFRAHLTSDLSWERLAQMQFVLKSSASLAPIALTGEPAQANNGELPSGRSTIKVQKCPSKSYTAIQAVIVEVQQSSDLDSTLARFFTAKLQEFLGRKELDRHLDADEAIVLGAALHAANLSDEIKLNRKLGMVDGSMYGFVVELDGPDLLKNESSKQLLVPTMKKLPSKVFRSIKHNKDFDVSLAYESENLLPPGVISTEVVRYQISGLTDVGEKMVGSGMPLSKEFLAEAKGKLEALNKKDAERRRTAELKNNLEGYIYTTKEKIETYEDCAKVSTSDERQSFVEKLDQVQDWLYTDGEDANATEFQEHLDMLKAVGDPIFFRLKELIARLVAAEHARK 355
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1086 355 FunFam Heat shock 70 kDa protein 4 238 349 - -
Glsi12g1086 355 PANTHER HSC70CB, ISOFORM G-RELATED 101 231 - -
Glsi12g1086 355 Pfam Hsp70 protein 238 338 IPR013126 GO:0005524|GO:0140662
Glsi12g1086 355 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 265 343 IPR029048 -
Glsi12g1086 355 Gene3D - 238 350 IPR029048 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi12g1086 Glsi-ChrGlsi12 28708523 28711262 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1086 105 340 Calmodulin-binding Proteins AT3G12580 25.830 1.29e-10 60.8