Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1062 ATGATTTCCACTGCATATTTAGGGTACCCTACTAATCTAAACTTCAACTATGATGCATTGGGACAGTTGCTGAATTTCCACATTAATAATGCTGGTGATCCATTTATTGGGAACAGTAATGACTTTAACTCAATACCCTTTGAGCTCTGTGTTCTAGATTGGTTTGCCAGGCTTTGGGAAATAGAGAAGAGTGAGTATTGGGGATATTTTACCACTGGTGGAACTGAAGGCAATCTTCATGGCATTCTAGTAGGGAGGGAACTATTTCCAAATGGAATACTATATACCTCAAAAGACACGCATTATTCAGTGTTCAAAATAGCAAGAATGTATAGAATGGAATGCGTTAAGGTAGGGTCTCTAATCTCTGGTGAGATTGACTATGACGATCTCAAGACTTGTCTTCTTGCTCACAAGGATAAGCCAGCCATCATCAACCTGAACATAGGGACAACTGTAAAAGGAGCTGTTGATGACCTTGATCTTGTGCTACAAGCACTTGGGGAAAGTGGTTTCACTCAAGATCGATTCTATATTCACTGTGACGGAGCTTTGTTTGGAATCATGCTACCTTTTCATAATGCGGCGCCAAAGGTTACTTTCAAGAAACCTATTGGAAGCATAACTATTTCAGGCCATAAGTTTCTGGGATGTCCAATTCCTTGTGGAGTTGTAATAACTCGTTCAAAGTATATCAATGCAATCTCTAGAGATGTTGAATATATTGCTTCAAGAGATACCACAATCACAGGAAGCCGCTGTGGGCATGCTCCAATCTTCCTGTGGTACGCTCTCAACAAGAAAGGTCTCAAAGGGCTCCATAAAGAAGTCCAAAACTGCATAAAAAATGCCATTTACTTGAGGGATCGCCTAAGGGCTAACGGCATAGGTGCTATGCTGAATAAGTATAGCAGCACAGTTGTGTTGGAGAGGCCATTTGATGATGCATTTTCTCTTAGGTGGAGCTTGGCTTGCAAAGGAAATATCTCACATGTGGTGGCGTTGCAGCACGTGACCACGGAAATGCTGGACACCTTTGTGAGTGAGTTGGTGAAAAATCGCTCCATTTGGTACCAAAATGGACAGAAGATTCCCTGCATTGCTGAGGAAATTGGTGCTGAAAATTGTTATTGTGCTTTGCATATATAA 1149 0.4134 MISTAYLGYPTNLNFNYDALGQLLNFHINNAGDPFIGNSNDFNSIPFELCVLDWFARLWEIEKSEYWGYFTTGGTEGNLHGILVGRELFPNGILYTSKDTHYSVFKIARMYRMECVKVGSLISGEIDYDDLKTCLLAHKDKPAIINLNIGTTVKGAVDDLDLVLQALGESGFTQDRFYIHCDGALFGIMLPFHNAAPKVTFKKPIGSITISGHKFLGCPIPCGVVITRSKYINAISRDVEYIASRDTTITGSRCGHAPIFLWYALNKKGLKGLHKEVQNCIKNAIYLRDRLRANGIGAMLNKYSSTVVLERPFDDAFSLRWSLACKGNISHVVALQHVTTEMLDTFVSELVKNRSIWYQNGQKIPCIAEEIGAENCYCALHI 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1062 382 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 207 228 IPR021115 GO:0016831
Glsi12g1062 382 PANTHER - 5 381 - -
Glsi12g1062 382 SUPERFAMILY PLP-dependent transferases 6 352 IPR015424 -
Glsi12g1062 382 Gene3D - 41 292 IPR015421 GO:0003824
Glsi12g1062 382 Pfam Pyridoxal-dependent decarboxylase conserved domain 68 302 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1062 Glsi-ChrGlsi12 28366136 28367867 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1062 106 320 Calmodulin-binding Proteins AT1G65960 24.554 2.65e-07 50.1