Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1060 ATGGAGAATGCGATGGTGCAGAACATGTCAATGGCTATTGTTTCTTCAGTTCTGGCCGGAGATAATCAGGGGTTGCCTTTAGAGATCAATACTAACGTGCCCTTCGAAGAAAAAGATGACCAGACAGAGAATGGGCATTTGTTAGAACTTTCCATCTCTGATCAGTTCAATGGGGACACAGAAGCAGATTTGGCTGACTTGCTGAATTTCCACATTAATAATGCTGGTGATCTATTTATTGGGAACAGTAATGACTTTAATTCAATACCCTTTGAGCTCTGTGTTCTAGATTGGAGGGAACTATTTCCAAATGGAATACTATATACCTCAAAAGACGCGCATTATTCAGTGTTCAAAATAGCAAGAATGTATAGAATGGAATGCGTTAAGGTTGGGTCTCTAATCTCTGGTGAGATTGACTATGACGATCTCAAGACTTGTCTTCTTGCTCACAGGGATAAGCCAGCCATCATCAACCTCAACATAGGGACAACTGTAAAAGGAGCTGTTGATGACCTTGATCTTGTACTACAAGCACTTGGGGAAAGTGGTTTCACTCAAGATCGATTCTATATTCACTGTGACGGAGCTTTGTTTGGAATCATGCTACCTTTTCATAATGCAGCAACAAAGGTTACTTTCAAGAAACCTATTGGAAGCATAACTATTTCAGGCCATAAGTTTCTGGGATGTCCAATTCCTTGTGGAGTTGTAATAACTCGTTCAAAGTATATCATTGCATTCTCCGGAGATGTTGAATTTATTGCTTCAAGAGATACCACAATCACAGGAAGCCGCTGTGGGCATGCTCCAATCTTCCTGTGGTACGCTCTCAACAAGAAAGGTCTCAAAGGGCTCCATAAAGAAGTCCAAAACTGCATAAAAAATGCCATTTACTTGAGGGATCGCCTAAGGGCTAACGGCATAGGTGCTATGCTGAATAAGTATAGCAGCACAGTTGTGTTGGAGAGGCCATTTGATGATGCATTTTCTCTTAGGTGGAGCTTGGCTTGCAAAGGAAATATCTCACATGTGGTGGCGTTGCAGCACGTGACCACGGAAATGCTGGACACCTTTGTGAGTGAGTTGGTGAAAAATCGCTCCATTTGGTACCAAAATGGACAGAAGATTCCCTGCATTGCTGAGGAAATTGGTGCTGAAAATTGTTATTGTGCTTTGCATATATAA 1188 0.4167 MENAMVQNMSMAIVSSVLAGDNQGLPLEINTNVPFEEKDDQTENGHLLELSISDQFNGDTEADLADLLNFHINNAGDLFIGNSNDFNSIPFELCVLDWRELFPNGILYTSKDAHYSVFKIARMYRMECVKVGSLISGEIDYDDLKTCLLAHRDKPAIINLNIGTTVKGAVDDLDLVLQALGESGFTQDRFYIHCDGALFGIMLPFHNAATKVTFKKPIGSITISGHKFLGCPIPCGVVITRSKYIIAFSGDVEFIASRDTTITGSRCGHAPIFLWYALNKKGLKGLHKEVQNCIKNAIYLRDRLRANGIGAMLNKYSSTVVLERPFDDAFSLRWSLACKGNISHVVALQHVTTEMLDTFVSELVKNRSIWYQNGQKIPCIAEEIGAENCYCALHI 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1060 395 PANTHER - 99 394 - -
Glsi12g1060 395 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 220 241 IPR021115 GO:0016831
Glsi12g1060 395 SUPERFAMILY PLP-dependent transferases 100 365 IPR015424 -
Glsi12g1060 395 Pfam Pyridoxal-dependent decarboxylase conserved domain 106 315 IPR002129 GO:0016830|GO:0019752|GO:0030170
Glsi12g1060 395 Gene3D - 95 305 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1060 Glsi-ChrGlsi12 28337064 28339153 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1060 162 315 Calmodulin-binding Proteins AT3G17760 25.767 4.47e-07 50.1