Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1057 ATGGCTTCCAATCAAACACCCACGGCCCAACCCAAACTCACCCTTCCAAACACCGACCTTGAGCAGCAGCAAACAACTCTAGAGATCGAAACCAAGGACTTTGACTACTCAAAACGAGCCCAGTGGCTTCGAGCCGCGGTCCTAGGAGCCAACGATGGGTTGGTCTCTACGGCATCGTTAATGATGGGCGTTGGAGCAGTGAAGCAAGACATTAAGGCCATGATCCTAACTGGGTTCGCTGGGTTGGTGGCTGGGGCTTGCAGTATGGCCATAGGGGAGTTTGTGTCTGTGTACTCACAGTTGGACATAGAGGTGGCTCAGATGAAGAGAAAGAAGGAAAGAGGGAGAGAAGAAGAAGATGACGAGGAAGAAGAGAAGGAGAGTTTGCCAAACCCTTTACAAGCAGGAGCAGCATCGGCTTTAGCGTTTTCGGTAGGTGCAATGGTGCCATTACTAGCGGCGTCGTTTATAAGGGAGTATAAGGTGAGGATAGGAATGGTGGTGGGTGCGGTGAGCGTTGCCTTGGTGTTGTTTGGGTGGTTAGGGGCTGTGTTGGGTAAGGCTCCAACGTTGAGGTCTAGTTTGAGAGTGCTGTTTGGGGGTTGGCTAGCCATGGCTATTACTTTTGGGCTAACCAAGTTGATTGGGTCGAGCGGCCTTTAG 663 0.5158 MASNQTPTAQPKLTLPNTDLEQQQTTLEIETKDFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKRKKERGREEEDDEEEEKESLPNPLQAGAASALAFSVGAMVPLLAASFIREYKVRIGMVVGAVSVALVLFGWLGAVLGKAPTLRSSLRVLFGGWLAMAITFGLTKLIGSSGL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1057 220 CDD Nodulin-21 41 189 - -
Glsi12g1057 220 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 21 215 IPR008217 GO:0005384|GO:0030026
Glsi12g1057 220 Pfam VIT family 123 212 IPR008217 GO:0005384|GO:0030026
Glsi12g1057 220 Pfam VIT family 43 125 IPR008217 GO:0005384|GO:0030026
Glsi12g1057 220 Coils Coil 98 125 - -
Glsi12g1057 220 MobiDBLite consensus disorder prediction 110 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1057 Glsi-ChrGlsi12 28318351 28319013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1057 17 220 Nodulin-like Gene Family AT3G43660 71.569 1.92e-102 293