Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1048 ATGGAAGGAAATTTGTCTCAGGGAGGTATAATTCCGGTGGGGGCTTCTTTTGGTGGTTTTGATTTGCCAGGATCAATGCGAGTTCCTCATCAAACACAGCATCCCCACACCCTTCACCAACATCAAACTCATCCACGCCAAGGCCATTCCTCGATTCATGATGGTTTTCCTCTTACTATGGGAACCTTGCAGAACTGTGATCAAACCATTTCAATGACGGACTTTAGTAGGGGAGATAAAAGCAAAAGCTCGGCAAGTGAGGAGGATGAGCCAAGCTTTACAGAAGATGGTGCTGATGGTCACAATGAATCGGGTAGAGGGAAAAAGGGTTCACCTTGGCAGCGTGTGAAGTGGACTGATAAGATGGTGAAGCTTCTGATAACAGCCGTTTCTTATGTTGGAGAGGATGCAACTTCTGATTGCGGTGGCGGAGGAAGAAGGAAATTTGCAGTTTTACAGAAAAAGGGTAAGTGGAAAGCTATTTCCAAGGTCATGGCTGAAAGGAGTTATCATGTTTCTCCTCAGCAGTGTGAGGATAAATTTAATGATCTTAATAAGAGGTATAAAAAACTTAATGATATGCTTGGGAGGGGCACTTCATGTCAGGTTGTTGAGAAGCCTGCCCTGTTGGATGTAATAGATTATCTTTCTGAGAAAGAAAAGGATGATGTTCGGAAAATATTAAGCTCAAAACACCTTTTCTATGAAGAGATGTGTTCATACCATAATTGTAACAGACTGCATTTACCCCATGATCCAGCATTGCAACGTTCACTGCAGTTAGCTCTCAGAAATAGAGATGATCATGATGATGATGTCAGAAGGTCCCATCATGATGATAATGATGAAGATGATCCAGATGTGGAAACCGATGATCATGATGACTTTGAAGAGAATTATCCTTCCCATGGAGATAACCGAGGAACATATGGGGTATCAGGGGGACCTATGAAGAAATTGAAACAAGGCCAAGAAGATGTTATATTTGGGAATTCCTCAAATCCTCGGGACTGCAACAAAAGTTCTTATCCTCATGGGCAGATGGTCCAATCTGATGTGAATAAAGTTTTCCCTGAAAGTATGAGATCAGCATGGTTACAAAAGCAATGGATTGAATCTAGATCACTTCAGTTAGAAGAACAGAAGGTACAAATTCAGTTTGAGATGTTAGAACTGGAGAAACAGAGGTTCAAGTGGCAGAGGTTTAGTAAAAAAAAGGACCGAGATTTGGAAAAATTGAGGATGGAAAATGAGAGAATGAAGCTTGAAAATGAACGTATGGCTTTAGAATTGAAGCGCAAGGAGATGGGCAGTGGCTTTAACTAG 1326 0.4148 MEGNLSQGGIIPVGASFGGFDLPGSMRVPHQTQHPHTLHQHQTHPRQGHSSIHDGFPLTMGTLQNCDQTISMTDFSRGDKSKSSASEEDEPSFTEDGADGHNESGRGKKGSPWQRVKWTDKMVKLLITAVSYVGEDATSDCGGGGRRKFAVLQKKGKWKAISKVMAERSYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVEKPALLDVIDYLSEKEKDDVRKILSSKHLFYEEMCSYHNCNRLHLPHDPALQRSLQLALRNRDDHDDDVRRSHHDDNDEDDPDVETDDHDDFEENYPSHGDNRGTYGVSGGPMKKLKQGQEDVIFGNSSNPRDCNKSSYPHGQMVQSDVNKVFPESMRSAWLQKQWIESRSLQLEEQKVQIQFEMLELEKQRFKWQRFSKKKDRDLEKLRMENERMKLENERMALELKRKEMGSGFN 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1048 441 PANTHER F16F4.11 PROTEIN-RELATED 1 437 - -
Glsi12g1048 441 Gene3D - 118 190 - -
Glsi12g1048 441 MobiDBLite consensus disorder prediction 80 113 - -
Glsi12g1048 441 Coils Coil 375 395 - -
Glsi12g1048 441 MobiDBLite consensus disorder prediction 22 60 - -
Glsi12g1048 441 MobiDBLite consensus disorder prediction 73 113 - -
Glsi12g1048 441 Coils Coil 403 435 - -
Glsi12g1048 441 MobiDBLite consensus disorder prediction 267 282 - -
Glsi12g1048 441 Pfam Myb/SANT-like DNA-binding domain 115 241 IPR044822 -
Glsi12g1048 441 MobiDBLite consensus disorder prediction 267 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1048 Glsi-ChrGlsi12 28266936 28268261 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi12g1048 Myb_DNA-bind_4 3e-23 CL0123