Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1044 ATGAAGGGTTTACTTAGCAGCTATACAGCCACTATGGAGAAAAATAAGCCATATGTAGCAATGGTCTTCATTCAGTTTGTGTATGCAGGCATGGCTTTGCTGTCCAAGGCTGCAATTTCCAAAGGGATGAACCCCTATGTTTTTGTCGTTTATCGCCAAGTTTTTGCATCAATTGCCTTGTCTCCATTTGCTTTCTTTGAAAGTAGGCAGGCTGCTTCCTTGTCATTCAACTTGCTCTGCAAAATTTTCCTTGTTGCCCTATTTGGGTTGACATTGAGTTCAAACCTTTACTATGTTGCAATCAGCTATACTTCTGCAACATTTGCTGCAGCCACCACAAACACAATCCCTGCCATTACTTTTATCATGGCTTTTATAATTAGGGTGGAAAGCATTTCCATAAAACATAATCATGGATTGGCCAAGATTTTGGGTTCAATTCTGAGCCTTTCTGGGGCAATTACATTTGCTCTAGTCAAAGGGCCTCCTCTAGATTTCATGAAGTGGTATCCAGCAAATCAGGAGCATAATAACTCTCCATCATTAACAAAGGTTCACTCCAAAGGGGACTGTATAAAAGGCCCTATAATGATGCTTTCTGCTAACACTGCTTGGTCTTTGTGGCTTATACTGCAAGGTTTCATTGTCAAGCAATACCCAGCAAAATTTCGCCTCACCACTCTGCAATGCTTGTTTAGCTGCATACAATCAGCTGTTTTTGCTGTTGCAGTGGAGAGGAATTCTTCAGCATGGAAGCTTGGATGGGACATGCATCTTATTTCTGTGGCCTACTGTGGTGTAATTGTGACAGGGATTTGTTATTGGCTGCAAGTCTGGACTATAGAGGGGAAAGGCCCAGTTTTTACAGCAGTGTTTACCCCTCTAGCTCTTCTAATCACAGCAATCTTCTCAGCACTTTTGTGGAAGGAAACATTCTACTGGGGAAGTGTTGGTGGTGCCATTTTGTTGGTGGCTGGGCTCTACAGCGTTTTGTGGGGGAAGAACAGGGAGAGTGTAAAGGAGGAAAGTCATGAGGAGAGACAAGAAACAAAAGAGGAAACCAGTTTGGAATGCATTATACAGCACTGA 1089 0.4261 MKGLLSSYTATMEKNKPYVAMVFIQFVYAGMALLSKAAISKGMNPYVFVVYRQVFASIALSPFAFFESRQAASLSFNLLCKIFLVALFGLTLSSNLYYVAISYTSATFAAATTNTIPAITFIMAFIIRVESISIKHNHGLAKILGSILSLSGAITFALVKGPPLDFMKWYPANQEHNNSPSLTKVHSKGDCIKGPIMMLSANTAWSLWLILQGFIVKQYPAKFRLTTLQCLFSCIQSAVFAVAVERNSSAWKLGWDMHLISVAYCGVIVTGICYWLQVWTIEGKGPVFTAVFTPLALLITAIFSALLWKETFYWGSVGGAILLVAGLYSVLWGKNRESVKEESHEERQETKEETSLECIIQH 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1044 362 PANTHER WAT1-RELATED PROTEIN 16 344 IPR030184 GO:0016020|GO:0022857
Glsi12g1044 362 Pfam EamA-like transporter family 17 150 IPR000620 GO:0016020
Glsi12g1044 362 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Glsi12g1044 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 336 - -
Glsi12g1044 362 MobiDBLite consensus disorder prediction 341 356 - -
Glsi12g1044 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 150 - -
Glsi12g1044 362 MobiDBLite consensus disorder prediction 341 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1044 Glsi-ChrGlsi12 28212200 28215517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1044 12 349 Nodulin-like Gene Family AT2G37460 36.311 1.29e-80 249